WormBase Tree Display for Gene: WBGene00000719
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WBGene00000719 | Evidence | Person_evidence | WBPerson345 | ||||||
---|---|---|---|---|---|---|---|---|---|
WBPerson651 | |||||||||
SMap | S_parent | Sequence | T06E4 | ||||||
Identity | Version | 1 | |||||||
Name | CGC_name | col-146 | Person_evidence | WBPerson345 | |||||
Sequence_name | T06E4.6 | ||||||||
Molecular_name | T06E4.6 | ||||||||
T06E4.6.1 | |||||||||
CE06372 | |||||||||
Other_name | CELE_T06E4.6 | Accession_evidence | NDB | BX284605 | |||||
Public_name | col-146 | ||||||||
DB_info | Database | AceView | gene | 5K109 | |||||
WormQTL | gene | WBGene00000719 | |||||||
WormFlux | gene | WBGene00000719 | |||||||
NDB | locus_tag | CELE_T06E4.6 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00000719|UniProtKB=Q22260 | |||||||
family | PTHR24637 | ||||||||
NCBI | gene | 188178 | |||||||
RefSeq | protein | NM_073083.8 | |||||||
TREEFAM | TREEFAM_ID | TF316783 | |||||||
TrEMBL | UniProtAcc | Q22260 | |||||||
UniProt_GCRP | UniProtAcc | Q22260 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:21 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | col | ||||||||
Allele (20) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00074734 | ||||||||
00074735 | |||||||||
00074736 | |||||||||
00107707 | |||||||||
Ortholog (32) | |||||||||
Paralog (170) | |||||||||
Structured_description | Automated_description | Predicted to be a structural constituent of cuticle. Predicted to be located in membrane. Predicted to be part of collagen trimer. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | T06E4.6 | |||||||
Corresponding_transcript | T06E4.6.1 | ||||||||
Other_sequence (31) | |||||||||
Associated_feature | WBsf647097 | ||||||||
WBsf979015 | |||||||||
WBsf232277 | |||||||||
Experimental_info | RNAi_result | WBRNAi00115938 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00052657 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00062960 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00062958 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00052655 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00018301 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00035271 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1030436 | ||||||||
Expr1156263 | |||||||||
Expr2010340 | |||||||||
Expr2028583 | |||||||||
Drives_construct | WBCnstr00037339 | ||||||||
Construct_product | WBCnstr00037339 | ||||||||
Microarray_results (26) | |||||||||
Expression_cluster (320) | |||||||||
Interaction (57) | |||||||||
Map_info | Map | V | Position | 2.05728 | Error | 0.000418 | |||
Positive | Positive_clone | T06E4 | Inferred_automatically | From CDS info | |||||
From sequence, transcript, pseudogene data | |||||||||
Pseudo_map_position | |||||||||
Reference | WBPaper00025192 | ||||||||
WBPaper00038491 | |||||||||
WBPaper00055090 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |