WormBase Tree Display for Gene: WBGene00010051
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| WBGene00010051 | SMap | S_parent | Sequence | F54D5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F54D5.5 | |||||||
| Molecular_name | F54D5.5a | ||||||||
| F54D5.5a.1 | |||||||||
| CE36386 | |||||||||
| F54D5.5b | |||||||||
| CE37920 | |||||||||
| F54D5.5a.2 | |||||||||
| F54D5.5b.1 | |||||||||
| Other_name | CELE_F54D5.5 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | F54D5.5 | ||||||||
| DB_info | Database | AceView | gene | 2L856 | |||||
| WormQTL | gene | WBGene00010051 | |||||||
| WormFlux | gene | WBGene00010051 | |||||||
| NDB | locus_tag | CELE_F54D5.5 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00010051|UniProtKB=Q5FC73 | |||||||
| family | PTHR37960 | ||||||||
| NCBI | gene | 174771 | |||||||
| RefSeq | protein | NM_001393197.1 | |||||||
| NM_001027032.5 | |||||||||
| TREEFAM | TREEFAM_ID | TF316201 | |||||||
| TrEMBL | UniProtAcc | Q20771 | |||||||
| Q5FC73 | |||||||||
| UniProt_GCRP | UniProtAcc | Q5FC73 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:50 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (42) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (20) | |||||||||
| Paralog | WBGene00008578 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00015899 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00045357 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| Structured_description | Automated_description | Enriched in several structures, including ABalappaap; ABalpapaap; ciliated neurons; germ line; and pharyngeal cell based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-2; dpy-10; and hsf-1 based on microarray and RNA-seq studies. Is affected by ten chemicals including Tunicamycin; Cry5B; and glycine based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F54D5.5a | |||||||
| F54D5.5b | |||||||||
| Corresponding_CDS_history | F54D5.5:wp57 | ||||||||
| F54D5.5:wp119 | |||||||||
| Corresponding_transcript | F54D5.5a.1 | ||||||||
| F54D5.5a.2 | |||||||||
| F54D5.5b.1 | |||||||||
| Other_sequence | CJC10639_1 | ||||||||
| CRC06771_1 | |||||||||
| CBC04183_1 | |||||||||
| CR03095 | |||||||||
| Associated_feature (11) | |||||||||
| Experimental_info | RNAi_result (24) | ||||||||
| Expr_pattern | Expr1019054 | ||||||||
| Expr1034382 | |||||||||
| Expr1152117 | |||||||||
| Expr2004155 | |||||||||
| Expr2022379 | |||||||||
| Drives_construct | WBCnstr00031706 | ||||||||
| Construct_product | WBCnstr00031706 | ||||||||
| Microarray_results (24) | |||||||||
| Expression_cluster (195) | |||||||||
| Interaction (121) | |||||||||
| Map_info | Positive | Positive_clone | F54D5 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | II | 3.76281 | |||||||
| Reference | WBPaper00035598 | ||||||||
| Method | Gene |
