WormBase Tree Display for Gene: WBGene00008578
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| WBGene00008578 | SMap | S_parent | Sequence | F08G2 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F08G2.7 | |||||||
| Molecular_name | F08G2.7 | ||||||||
| F08G2.7.1 | |||||||||
| CE19779 | |||||||||
| Other_name | CELE_F08G2.7 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | F08G2.7 | ||||||||
| DB_info | Database | AceView | gene | 2O128 | |||||
| WormQTL | gene | WBGene00008578 | |||||||
| WormFlux | gene | WBGene00008578 | |||||||
| NDB | locus_tag | CELE_F08G2.7 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00008578|UniProtKB=Q9XVA2 | |||||||
| family | PTHR37960 | ||||||||
| NCBI | gene | 175036 | |||||||
| RefSeq | protein | NM_064502.6 | |||||||
| TREEFAM | TREEFAM_ID | TF316201 | |||||||
| TrEMBL | UniProtAcc | Q9XVA2 | |||||||
| UniProt_GCRP | UniProtAcc | Q9XVA2 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:49 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (150) | |||||||||
| Strain | WBStrain00031842 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (21) | |||||||||
| Paralog | WBGene00045357 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Panther | |||||||||
| WBGene00015899 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00010051 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Enriched in several structures, including ABalaaaarl; ABalaaaarr; ABalpapaap; ABarappaap; and muscle cell based on single-cell RNA-seq studies. Is affected by several genes including daf-2; daf-12; and sek-1 based on tiling array; microarray; and RNA-seq studies. Is affected by Zidovudine; Tunicamycin; and paraquat based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domain: Phosphorylation site. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F08G2.7 | |||||||
| Corresponding_transcript | F08G2.7.1 | ||||||||
| Other_sequence | DA03435 | ||||||||
| Associated_feature (14) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00012926 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00044050 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00030667 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00023405 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00086540 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr11711 | ||||||||
| Expr1014370 | |||||||||
| Expr1033737 | |||||||||
| Expr1148015 | |||||||||
| Expr2002310 | |||||||||
| Expr2020529 | |||||||||
| Drives_construct | WBCnstr00032861 | ||||||||
| Construct_product | WBCnstr00032861 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (81) | |||||||||
| Interaction | WBInteraction000030603 | ||||||||
| WBInteraction000384447 | |||||||||
| WBInteraction000542945 | |||||||||
| WBInteraction000542947 | |||||||||
| WBInteraction000547711 | |||||||||
| Map_info | Positive | Positive_clone | F08G2 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | II | 20.3919 | |||||||
| Reference | WBPaper00029005 | ||||||||
| WBPaper00060275 | |||||||||
| Method | Gene |
