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WormBase Tree Display for Gene: WBGene00006628

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Name Class

WBGene00006628SMapS_parentSequenceC02F5
IdentityVersion1
NameCGC_nametsp-2Person_evidenceWBPerson522
Sequence_nameC02F5.11
Molecular_nameC02F5.11
C02F5.11.1
CE25750
Other_nameCELE_C02F5.11Accession_evidenceNDBBX284603
Public_nametsp-2
DB_infoDatabaseAceViewgene3J326
WormQTLgeneWBGene00006628
WormFluxgeneWBGene00006628
NDBlocus_tagCELE_C02F5.11
PanthergeneCAEEL|WormBase=WBGene00006628|UniProtKB=Q95QY8
familyPTHR19282
NCBIgene259752
RefSeqproteinNM_066402.2
TREEFAMTREEFAM_IDTF315786
TrEMBLUniProtAccQ95QY8
UniProt_GCRPUniProtAccQ95QY8
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:41WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classtsp
Allele (14)
RNASeq_FPKM (74)
GO_annotation00088702
00088703
00114519
Contained_in_operonCEOP3803
Ortholog (16)
Paralog (20)
Structured_descriptionAutomated_descriptionPredicted to be located in membrane.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSC02F5.11
Corresponding_transcriptC02F5.11.1
Other_sequenceCR04158
CRC11579_1
Associated_featureWBsf651254
Experimental_infoRNAi_resultWBRNAi00039447Inferred_automaticallyRNAi_primary
WBRNAi00010014Inferred_automaticallyRNAi_primary
WBRNAi00005420Inferred_automaticallyRNAi_primary
WBRNAi00039446Inferred_automaticallyRNAi_primary
WBRNAi00005532Inferred_automaticallyRNAi_primary
WBRNAi00010016Inferred_automaticallyRNAi_primary
WBRNAi00039448Inferred_automaticallyRNAi_primary
Expr_patternExpr1017262
Expr1143558
Expr2017552
Expr2035690
Drives_constructWBCnstr00034256
Construct_productWBCnstr00034256
Microarray_results (16)
Expression_cluster (314)
InteractionWBInteraction000541264
WBInteraction000542854
Map_infoMapIIIPosition-0.355876Error0.000294
PositivePositive_cloneC02F5Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00025231
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene