WormBase Tree Display for Gene: WBGene00010124
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| WBGene00010124 | SMap | S_parent | Sequence | CHROMOSOME_IV | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F55G11.4 | |||||||
| Molecular_name | F55G11.4 | ||||||||
| F55G11.4.1 | |||||||||
| CE18750 | |||||||||
| Other_name | CELE_F55G11.4 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | F55G11.4 | ||||||||
| DB_info | Database | AceView | gene | 4N739 | |||||
| WormQTL | gene | WBGene00010124 | |||||||
| WormFlux | gene | WBGene00010124 | |||||||
| NDB | locus_tag | CELE_F55G11.4 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00010124|UniProtKB=G5EC22 | |||||||
| family | PTHR47155 | ||||||||
| NCBI | gene | 178248 | |||||||
| RefSeq | protein | NM_070084.6 | |||||||
| TREEFAM | TREEFAM_ID | TF316078 | |||||||
| TrEMBL | UniProtAcc | G5EC22 | |||||||
| UniProt_GCRP | UniProtAcc | G5EC22 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:51 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (38) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00010773 | ||||||||
| 00010774 | |||||||||
| 00010775 | |||||||||
| Ortholog (72) | |||||||||
| Paralog (35) | |||||||||
| Structured_description | Concise_description | F55G11.4 encodes a protein containing a CUB-like domain conserved amongst nematodes; F55G11.4 expression is increased in response to bacterial infection, suggesting that it plays a role in the defense response. | Paper_evidence | WBPaper00005382 | |||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 19 Jun 2013 00:00:00 | ||||||||
| Automated_description | Involved in defense response to Gram-negative bacterium. Expressed in intestine. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F55G11.4 | |||||||
| Corresponding_transcript | F55G11.4.1 | ||||||||
| Associated_feature | WBsf646499 | ||||||||
| WBsf998280 | |||||||||
| WBsf229357 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00002247 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00048552 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1969 | ||||||||
| Expr4724 | |||||||||
| Expr1019034 | |||||||||
| Expr1152336 | |||||||||
| Expr2004246 | |||||||||
| Expr2022469 | |||||||||
| Drives_construct | WBCnstr00012201 | ||||||||
| WBCnstr00031648 | |||||||||
| Construct_product | WBCnstr00012201 | ||||||||
| WBCnstr00031648 | |||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (380) | |||||||||
| Interaction | WBInteraction000141697 | ||||||||
| WBInteraction000206103 | |||||||||
| WBInteraction000393877 | |||||||||
| WBInteraction000398428 | |||||||||
| WBInteraction000435181 | |||||||||
| WBInteraction000454950 | |||||||||
| WBInteraction000503186 | |||||||||
| WBInteraction000558925 | |||||||||
| Map_info | Positive | Positive_clone | F55G11 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | IV | 6.81354 | |||||||
| Reference | WBPaper00005382 | ||||||||
| WBPaper00029438 | |||||||||
| WBPaper00051227 | |||||||||
| WBPaper00058665 | |||||||||
| WBPaper00062392 | |||||||||
| WBPaper00064841 | |||||||||
| WBPaper00065625 | |||||||||
| Method | Gene |
