WormBase Tree Display for Gene: WBGene00008032
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| WBGene00008032 | SMap | S_parent | Sequence | C39E9 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | C39E9.8 | |||||||
| Molecular_name (21) | |||||||||
| Other_name | CELE_C39E9.8 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | C39E9.8 | ||||||||
| DB_info | Database | AceView | gene | 4N847 | |||||
| WormQTL | gene | WBGene00008032 | |||||||
| WormFlux | gene | WBGene00008032 | |||||||
| NDB | locus_tag | CELE_C39E9.8 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00008032|UniProtKB=Q18541 | |||||||
| family | PTHR34401 | ||||||||
| NCBI | gene | 178255 | |||||||
| RefSeq | protein | NM_001268770.3 | |||||||
| NM_001027881.4 | |||||||||
| NM_001372943.2 | |||||||||
| NM_001268768.3 | |||||||||
| NM_001027882.9 | |||||||||
| NM_001268769.3 | |||||||||
| NM_001268767.3 | |||||||||
| TREEFAM | TREEFAM_ID | TF315641 | |||||||
| TrEMBL | UniProtAcc | D3YT45 | |||||||
| D3YT47 | |||||||||
| Q7JLS6 | |||||||||
| D3YT48 | |||||||||
| D3YT46 | |||||||||
| B3GWC9 | |||||||||
| Q18541 | |||||||||
| UniProt_GCRP | UniProtAcc | Q18541 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (56) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (30) | |||||||||
| Paralog | WBGene00010135 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WBGene00010501 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00013633 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00014039 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| Structured_description | Automated_description | Enriched in several structures, including MSaapapa; MSpapapa; arc ant V; g2; and germline precursor cell based on tiling array; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and dpy-10 based on microarray; RNA-seq; and proteomic studies. Is affected by twenty-eight chemicals including 1-methylnicotinamide; D-glucose; and Cry5B based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C39E9.8a | |||||||
| C39E9.8b | |||||||||
| C39E9.8c | |||||||||
| C39E9.8d | |||||||||
| C39E9.8e | |||||||||
| C39E9.8f | |||||||||
| C39E9.8g | |||||||||
| Corresponding_CDS_history | C39E9.8:wp52 | ||||||||
| Corresponding_transcript | C39E9.8a.1 | ||||||||
| C39E9.8b.1 | |||||||||
| C39E9.8c.1 | |||||||||
| C39E9.8d.1 | |||||||||
| C39E9.8e.1 | |||||||||
| C39E9.8f.1 | |||||||||
| C39E9.8g.1 | |||||||||
| Other_sequence (72) | |||||||||
| Associated_feature (14) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00011793 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00042226 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00070845 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00070844 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00029694 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1025576 | ||||||||
| Expr1033490 | |||||||||
| Expr1146217 | |||||||||
| Expr2001542 | |||||||||
| Expr2019763 | |||||||||
| Drives_construct | WBCnstr00033291 | ||||||||
| Construct_product | WBCnstr00033291 | ||||||||
| Microarray_results (31) | |||||||||
| Expression_cluster (247) | |||||||||
| Interaction | WBInteraction000008040 | ||||||||
| WBInteraction000324430 | |||||||||
| WBInteraction000341595 | |||||||||
| WBInteraction000438241 | |||||||||
| WBInteraction000521018 | |||||||||
| WBInteraction000550185 | |||||||||
| WBInteraction000561102 | |||||||||
| Map_info | Positive | Positive_clone | C39E9 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | IV | 7.8151 | |||||||
| Method | Gene |
