WormBase Tree Display for Gene: WBGene00008971
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WBGene00008971 | SMap | S_parent | Sequence | CHROMOSOME_IV | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | F20C5.6 | |||||||
Molecular_name | F20C5.6 | ||||||||
F20C5.6.1 | |||||||||
CE52919 | |||||||||
Other_name | CELE_F20C5.6 | Accession_evidence | NDB | BX284604 | |||||
Public_name | F20C5.6 | ||||||||
DB_info | Database | AceView | gene | 4J536 | |||||
WormQTL | gene | WBGene00008971 | |||||||
WormFlux | gene | WBGene00008971 | |||||||
NDB | locus_tag | CELE_F20C5.6 | |||||||
NCBI | gene | 177687 | |||||||
RefSeq | protein | NM_069112.7 | |||||||
TREEFAM | TREEFAM_ID | TF351173 | |||||||
TrEMBL | UniProtAcc | G5EFF2 | |||||||
UniProt_GCRP | UniProtAcc | G5EFF2 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:49 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (26) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00018040 | ||||||||
00018041 | |||||||||
Contained_in_operon | CEOP4308 | ||||||||
Ortholog | chrIV_pilon.g11157 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
Paralog | WBGene00007900 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
WBGene00007901 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
WBGene00194651 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Structured_description | Automated_description | Enriched in several structures, including ABalaaaala; ABalaapaaa; ABplpaaaaa; neurons; and ventral nerve cord based on microarray; tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and sir-2.1 based on microarray; RNA-seq; and tiling array studies. Is affected by twenty-four chemicals including 1-methylnicotinamide; rotenone; and bisphenol S based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | F20C5.6 | |||||||
Corresponding_CDS_history | F20C5.6:wp268 | ||||||||
Corresponding_transcript | F20C5.6.1 | ||||||||
Other_sequence | MH05645 | ||||||||
Associated_feature | WBsf230468 | ||||||||
WBsf230469 | |||||||||
Experimental_info | RNAi_result | WBRNAi00031164 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00013609 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00076319 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00045091 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1014175 | ||||||||
Expr1033904 | |||||||||
Expr1149040 | |||||||||
Expr2002777 | |||||||||
Expr2020995 | |||||||||
Drives_construct | WBCnstr00032557 | ||||||||
Construct_product | WBCnstr00032557 | ||||||||
Microarray_results (21) | |||||||||
Expression_cluster (220) | |||||||||
Interaction (34) | |||||||||
Map_info | Positive | Positive_clone | F20C5 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | IV | 3.96138 | |||||||
Method | Gene |