WormBase Tree Display for Gene: WBGene00015993
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| WBGene00015993 | SMap | S_parent | Sequence | C18H7 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | C18H7.1 | |||||||
| Molecular_name | C18H7.1a | ||||||||
| C18H7.1a.1 | |||||||||
| CE27718 | |||||||||
| C18H7.1b | |||||||||
| CE48644 | |||||||||
| C18H7.1c | |||||||||
| CE49103 | |||||||||
| C18H7.1b.1 | |||||||||
| C18H7.1c.1 | |||||||||
| Other_name | CELE_C18H7.1 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | C18H7.1 | ||||||||
| DB_info | Database | AceView | gene | 4B373 | |||||
| WormQTL | gene | WBGene00015993 | |||||||
| WormFlux | gene | WBGene00015993 | |||||||
| NDB | locus_tag | CELE_C18H7.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00015993|UniProtKB=Q9GZF5 | |||||||
| family | PTHR22588 | ||||||||
| NCBI | gene | 176888 | |||||||
| RefSeq | protein | NM_001307368.3 | |||||||
| NM_067558.6 | |||||||||
| NM_001380013.1 | |||||||||
| TrEMBL | UniProtAcc | Q9GZF5 | |||||||
| U4PB74 | |||||||||
| U4PQZ9 | |||||||||
| UniProt_GCRP | UniProtAcc | Q9GZF5 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:56 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (133) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00093068 | ||||||||
| 00093069 | |||||||||
| 00093070 | |||||||||
| Ortholog (36) | |||||||||
| Paralog | WBGene00007800 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| WormBase-Compara | |||||||||
| WBGene00015865 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WormBase-Compara | |||||||||
| WBGene00016048 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WormBase-Compara | |||||||||
| WBGene00000853 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00003482 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00003497 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00017965 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00019570 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00020579 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00021343 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Predicted to be an extracellular matrix structural constituent. Predicted to be involved in extracellular matrix organization. Predicted to be located in collagen-containing extracellular matrix. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C18H7.1a | |||||||
| C18H7.1b | |||||||||
| C18H7.1c | |||||||||
| Corresponding_transcript | C18H7.1a.1 | ||||||||
| C18H7.1b.1 | |||||||||
| C18H7.1c.1 | |||||||||
| Other_sequence (42) | |||||||||
| Associated_feature (12) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00010250 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00040982 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00011029 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00028524 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1014363 | ||||||||
| Expr1036833 | |||||||||
| Expr1145025 | |||||||||
| Expr2000997 | |||||||||
| Expr2019215 | |||||||||
| Drives_construct | WBCnstr00028401 | ||||||||
| Construct_product | WBCnstr00028401 | ||||||||
| Microarray_results (23) | |||||||||
| Expression_cluster (171) | |||||||||
| Interaction (24) | |||||||||
| Map_info | Positive | Positive_clone | C18H7 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | IV | -23.8784 | |||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| WBPaper00065331 | |||||||||
| Method | Gene |
