WormBase Tree Display for Gene: WBGene00000853
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| WBGene00000853 | Evidence | Paper_evidence | WBPaper00006072 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | M142 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | cut-6 | Person_evidence | WBPerson52 | |||||
| Sequence_name | M142.2 | ||||||||
| Molecular_name | M142.2 | ||||||||
| M142.2.1 | |||||||||
| CE35746 | |||||||||
| Other_name | CELE_M142.2 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | cut-6 | ||||||||
| DB_info | Database | AceView | gene | 3M5 | |||||
| WormQTL | gene | WBGene00000853 | |||||||
| WormFlux | gene | WBGene00000853 | |||||||
| NDB | locus_tag | CELE_M142.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00000853|UniProtKB=Q21540 | |||||||
| family | PTHR22907 | ||||||||
| NCBI | gene | 176520 | |||||||
| RefSeq | protein | NM_066999.8 | |||||||
| SwissProt | UniProtAcc | Q21540 | |||||||
| TREEFAM | TREEFAM_ID | TF315307 | |||||||
| UniProt_GCRP | UniProtAcc | Q21540 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:21 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | cut | ||||||||
| Allele (84) | |||||||||
| Strain | WBStrain00032270 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00072032 | ||||||||
| 00072033 | |||||||||
| 00072034 | |||||||||
| 00072035 | |||||||||
| 00072036 | |||||||||
| Ortholog (30) | |||||||||
| Paralog (33) | |||||||||
| Structured_description | Automated_description | Predicted to be a structural constituent of cuticle. Located in alae of collagen and cuticulin-based cuticle extracellular matrix. Expressed in hypodermal cell. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | M142.2 | |||||||
| Corresponding_CDS_history | M142.2:wp110 | ||||||||
| Corresponding_transcript | M142.2.1 | ||||||||
| Other_sequence (12) | |||||||||
| Associated_feature | WBsf645593 | ||||||||
| WBsf717988 | |||||||||
| WBsf994187 | |||||||||
| WBsf1015874 | |||||||||
| Experimental_info | RNAi_result (15) | ||||||||
| Expr_pattern | Chronogram638 | ||||||||
| Expr2636 | |||||||||
| Expr2637 | |||||||||
| Expr1023883 | |||||||||
| Expr1030527 | |||||||||
| Expr1154663 | |||||||||
| Expr2010603 | |||||||||
| Expr2028843 | |||||||||
| Drives_construct | WBCnstr00002867 | ||||||||
| WBCnstr00010881 | |||||||||
| Antibody | WBAntibody00000671 | ||||||||
| Microarray_results (26) | |||||||||
| Expression_cluster (177) | |||||||||
| Interaction | WBInteraction000386065 | ||||||||
| WBInteraction000552005 | |||||||||
| WBInteraction000573387 | |||||||||
| Map_info | Map | III | Position | 5.59305 | Error | 0.00157 | |||
| Positive | Positive_clone | M142 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00006072 | ||||||||
| WBPaper00022640 | |||||||||
| WBPaper00025242 | |||||||||
| WBPaper00030688 | |||||||||
| WBPaper00039653 | |||||||||
| WBPaper00051735 | |||||||||
| WBPaper00064676 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
