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WormBase Tree Display for Gene: WBGene00008628

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Name Class

WBGene00008628SMapS_parentSequenceF09F3
IdentityVersion2
NameCGC_namettr-21
Sequence_nameF09F3.6
Molecular_nameF09F3.6
F09F3.6.1
CE09289
Other_nameCELE_F09F3.6Accession_evidenceNDBBX284605
Public_namettr-21
DB_infoDatabaseAceViewgene5O334
WormQTLgeneWBGene00008628
WormFluxgeneWBGene00008628
NDBlocus_tagCELE_F09F3.6
PanthergeneCAEEL|WormBase=WBGene00008628|UniProtKB=O17776
familyPTHR21700
NCBIgene184253
RefSeqproteinNM_074032.9
TREEFAMTREEFAM_IDTF315773
TrEMBLUniProtAccO17776
UniProt_GCRPUniProtAccO17776
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:49WBPerson1971EventImportedInitial conversion from CDS class of WS125
220 Sep 2007 11:48:01WBPerson2970Name_changeCGC_namettr-21
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classttr
Allele (13)
RNASeq_FPKM (74)
GO_annotation00030673
00030674
00030675
00116508
Ortholog (20)
Paralog (62)
Structured_descriptionAutomated_descriptionInvolved in defense response to Gram-negative bacterium. Predicted to be located in cell surface and extracellular region.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSF09F3.6
Corresponding_transcriptF09F3.6.1
Other_sequenceCSC00093_1
FD514465.1
FD514863.1
Associated_featureWBsf653349
WBsf979088
WBsf234874
Experimental_infoRNAi_resultWBRNAi00012996Inferred_automaticallyRNAi_primary
WBRNAi00030719Inferred_automaticallyRNAi_primary
WBRNAi00092240Inferred_automaticallyRNAi_primary
WBRNAi00044149Inferred_automaticallyRNAi_primary
Expr_patternExpr1019224
Expr1148117
Expr2017586
Expr2035725
Drives_constructWBCnstr00032817
Construct_productWBCnstr00032817
Microarray_results (18)
Expression_cluster (218)
Interaction (21)
Map_infoMapVPosition5.69187Error0.0004
PositivePositive_cloneF09F3Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00050183
WBPaper00058665
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene