WormBase Tree Display for Gene: WBGene00008628
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WBGene00008628 | SMap | S_parent | Sequence | F09F3 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | ttr-21 | |||||||
Sequence_name | F09F3.6 | ||||||||
Molecular_name | F09F3.6 | ||||||||
F09F3.6.1 | |||||||||
CE09289 | |||||||||
Other_name | CELE_F09F3.6 | Accession_evidence | NDB | BX284605 | |||||
Public_name | ttr-21 | ||||||||
DB_info | Database | AceView | gene | 5O334 | |||||
WormQTL | gene | WBGene00008628 | |||||||
WormFlux | gene | WBGene00008628 | |||||||
NDB | locus_tag | CELE_F09F3.6 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00008628|UniProtKB=O17776 | |||||||
family | PTHR21700 | ||||||||
NCBI | gene | 184253 | |||||||
RefSeq | protein | NM_074032.9 | |||||||
TREEFAM | TREEFAM_ID | TF315773 | |||||||
TrEMBL | UniProtAcc | O17776 | |||||||
UniProt_GCRP | UniProtAcc | O17776 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:49 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 20 Sep 2007 11:48:01 | WBPerson2970 | Name_change | CGC_name | ttr-21 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | ttr | ||||||||
Allele (13) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00030673 | ||||||||
00030674 | |||||||||
00030675 | |||||||||
00116508 | |||||||||
Ortholog (20) | |||||||||
Paralog (62) | |||||||||
Structured_description | Automated_description | Involved in defense response to Gram-negative bacterium. Predicted to be located in cell surface and extracellular region. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | F09F3.6 | |||||||
Corresponding_transcript | F09F3.6.1 | ||||||||
Other_sequence | CSC00093_1 | ||||||||
FD514465.1 | |||||||||
FD514863.1 | |||||||||
Associated_feature | WBsf653349 | ||||||||
WBsf979088 | |||||||||
WBsf234874 | |||||||||
Experimental_info | RNAi_result | WBRNAi00012996 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00030719 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00092240 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00044149 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1019224 | ||||||||
Expr1148117 | |||||||||
Expr2017586 | |||||||||
Expr2035725 | |||||||||
Drives_construct | WBCnstr00032817 | ||||||||
Construct_product | WBCnstr00032817 | ||||||||
Microarray_results (18) | |||||||||
Expression_cluster (218) | |||||||||
Interaction (21) | |||||||||
Map_info | Map | V | Position | 5.69187 | Error | 0.0004 | |||
Positive | Positive_clone | F09F3 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00050183 | ||||||||
WBPaper00058665 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |