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WormBase Tree Display for Gene: WBGene00001076

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Name Class

WBGene00001076EvidencePerson_evidenceWBPerson261
WBPerson2629
SMapS_parentSequenceF54D8
IdentityVersion2
NameCGC_namedpy-17Person_evidenceWBPerson261
Sequence_nameF54D8.1
Molecular_nameF54D8.1
F54D8.1.1
CE11066
Other_nameCELE_F54D8.1Accession_evidenceNDBBX284603
Public_namedpy-17
DB_infoDatabaseAceViewgene3G197
WormQTLgeneWBGene00001076
WormFluxgeneWBGene00001076
NDBlocus_tagCELE_F54D8.1
PanthergeneCAEEL|WormBase=WBGene00001076|UniProtKB=Q20778
familyPTHR24637
NCBIgene175696
RefSeqproteinNM_065685.9
TREEFAMTREEFAM_IDTF321978
TrEMBLUniProtAccQ20778
UniProt_GCRPUniProtAccQ20778
SpeciesCaenorhabditis elegans
HistoryVersion_change102 Jul 2004 16:55:45WBPerson1845EventCreated
202 Jul 2004 16:42:33WBPerson1971EventAcquires_mergeWBGene00018799
Acquires_mergeWBGene00018799
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classdpy
Reference_alleleWBVar00143004
Allele (28)
Legacy_informatione164 : medium dumpy spindle-shaped adult; old adults sometimes less dumpy; strong dumpy L1. ES3 (all stages). ME2. NA7 (e1345ts e905pdi e1295icr etc.).
See also e164, e417, e2145
[C.elegansII] e164 : medium dumpy, spindle-shaped adult; old adults sometimes less dumpy; strong dumpy L1; low penetrance defects in outgrowth of posterior canal cell processes. ES3 (all stages). ME2. OA6: e1345ts, e905pdi, e1295icr, e1345, e2145 etc. [Brenner 1974; NJ]
Strain (204)
RNASeq_FPKM (74)
GO_annotation00069103
00069104
00069105
00108198
Ortholog (29)
ParalogWBGene00000650Caenorhabditis elegansFrom_analysisInparanoid_8
WormBase-Compara
WBGene00000251Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000252Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000256Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000527Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000593Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000594Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000596Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000597Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000598Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000601Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000602Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000603Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000608Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000609Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000610Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000611Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000613Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000614Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000615Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000616Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000618Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000620Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000621Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000622Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000623Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000625Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000626Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000628Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000629Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000630Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000631Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000632Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000633Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000634Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000636Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000638Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000639Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000640Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000641Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000644Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000645Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000647Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000648Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000649Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000651Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000652Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000653Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000654Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000655Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000656Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000657Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000658Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000659Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000662Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000663Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000665Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000666Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000667Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000668Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000669Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000670Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000671Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000672Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000673Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000674Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000675Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000676Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000677Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000678Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000679Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000680Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000681Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000682Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000683Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000684Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000685Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000687Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000688Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000689Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000690Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000691Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000692Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000693Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000694Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000695Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000696Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000697Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000698Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000699Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000702Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000703Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000704Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000705Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000706Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000707Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000708Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000710Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000711Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000712Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000713Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000714Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000715Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000716Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000719Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000720Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000722Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000723Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000724Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000725Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000726Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000727Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000728Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000729Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000730Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000731Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000732Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000733Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000734Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000735Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000736Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000737Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000738Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000739Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000740Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000741Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000742Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000743Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000744Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000745Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000746Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000747Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000748Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000750Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000751Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000752Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000753Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000754Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000756Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000758Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000759Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00001064Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00001065Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00001066Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00001069Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00001070Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00001071Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00001072Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00001074Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00001075Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00001263Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00002280Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00003057Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00003169Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00004300Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00004394Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00004397Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00004398Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00005017Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00005018Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00013489Caenorhabditis elegansFrom_analysisWormBase-Compara
Structured_descriptionConcise_descriptiondpy-17 encodes a cuticle collagen; during development, dpy-17 activity is required for normal body morphology, hermaphrodite tail development, and outgrowth of posterior canal cell processes; genetic and immunofluorescence studies suggest that extracellular assembly of DPY-17 and the essential SQT-3 cuticle collagen is interdependent, as loss of dpy-17 activity results in intracellular retention of SQT-3 and dpy-17(gf) mutations suppress mutations in dpy-31, which encodes a zinc-metalloprotease predicted to affect C-terminal proteolytic maturation of SQT-3.Paper_evidenceWBPaper00000031
WBPaper00005485
WBPaper00027067
Curator_confirmedWBPerson48
WBPerson1843
Date_last_updated08 Aug 2006 00:00:00
Automated_descriptionPredicted to be a structural constituent of cuticle. Involved in cuticle development involved in collagen and cuticulin-based cuticle molting cycle. Predicted to be part of collagen trimer. Used to study Marfan syndrome.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Disease_infoExperimental_modelDOID:14323Homo sapiensPaper_evidenceWBPaper00046710
Curator_confirmedWBPerson324
Date_last_updated25 Sep 2015 00:00:00
Models_disease_in_annotationWBDOannot00000379
Molecular_infoCorresponding_CDSF54D8.1
Corresponding_transcriptF54D8.1.1
Other_sequence (37)
Associated_featureWBsf645149
WBsf645150
WBsf658889
WBsf658890
WBsf658891
WBsf658892
WBsf658893
WBsf658894
WBsf224863
Experimental_infoRNAi_resultWBRNAi00073110Inferred_automaticallyRNAi_primary
WBRNAi00002433Inferred_automaticallyRNAi_primary
WBRNAi00073111Inferred_automaticallyRNAi_primary
WBRNAi00025629Inferred_automaticallyRNAi_primary
WBRNAi00048322Inferred_automaticallyRNAi_primary
WBRNAi00048323Inferred_automaticallyRNAi_primary
WBRNAi00002758Inferred_automaticallyRNAi_primary
WBRNAi00032800Inferred_automaticallyRNAi_primary
Expr_patternExpr13628
Expr1018849
Expr1030684
Expr1152124
Expr2011059
Expr2029296
Drives_constructWBCnstr00000440
WBCnstr00037096
WBCnstr00039888
Construct_productWBCnstr00000440
WBCnstr00037096
Microarray_results (19)
Expression_cluster (311)
Interaction (64)
WBProcessWBbiopr:00000124
Map_infoMapIIIPosition-2.13512Error0.005986
Well_ordered
PositiveInside_rearrnDp2
mT1
ctDp11
Positive_cloneF54D8Inferred_automaticallyFrom sequence, transcript, pseudogene data
Mapping_data2_point (41)
Multi_point (244)
Pos_neg_data1578
1582
1586
1596
1616
3244
4711
5141
8706
Reference (119)
Remark[Smardon A] dpy-17(e164) rescued by sEx271 [F54D8 + pCes1943{rol-6(su1006dm)}]. F54D8.1 encodes predicted protein with C-term similarity to sqt-1 collagen, therefore candidate for dpy-17.
MethodGene