WormBase Tree Display for Gene: WBGene00000682
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WBGene00000682 | Evidence | Person_evidence | WBPerson345 | ||||||
---|---|---|---|---|---|---|---|---|---|
WBPerson651 | |||||||||
SMap | S_parent | Sequence | Y41D4A | ||||||
Identity | Version | 1 | |||||||
Name | CGC_name | col-108 | Person_evidence | WBPerson345 | |||||
Sequence_name | Y41D4A.2 | ||||||||
Molecular_name | Y41D4A.2 | ||||||||
Y41D4A.2.1 | |||||||||
CE36738 | |||||||||
Other_name | CELE_Y41D4A.2 | Accession_evidence | NDB | BX284604 | |||||
Public_name | col-108 | ||||||||
DB_info | Database | AceView | gene | 4C533 | |||||
WormQTL | gene | WBGene00000682 | |||||||
WormFlux | gene | WBGene00000682 | |||||||
NDB | locus_tag | CELE_Y41D4A.2 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00000682|UniProtKB=Q95Y22 | |||||||
family | PTHR24637 | ||||||||
NCBI | gene | 176985 | |||||||
RefSeq | protein | NM_067732.4 | |||||||
TrEMBL | UniProtAcc | Q95Y22 | |||||||
UniProt_GCRP | UniProtAcc | Q95Y22 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:21 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | col | ||||||||
Allele (41) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00089551 | ||||||||
00089552 | |||||||||
00089553 | |||||||||
00107676 | |||||||||
Ortholog (35) | |||||||||
Paralog (163) | |||||||||
Structured_description | Automated_description | Predicted to be a structural constituent of cuticle. Predicted to be located in membrane. Predicted to be part of collagen trimer. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | Y41D4A.2 | |||||||
Corresponding_CDS_history | Y41D4A.2:wp124 | ||||||||
Corresponding_transcript | Y41D4A.2.1 | ||||||||
Other_sequence (220) | |||||||||
Associated_feature | WBsf716769 | ||||||||
WBsf995524 | |||||||||
WBsf995525 | |||||||||
WBsf227976 | |||||||||
Experimental_info | RNAi_result | WBRNAi00007370 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00056369 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00071510 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00020488 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00071912 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1018715 | ||||||||
Expr1030406 | |||||||||
Expr1159856 | |||||||||
Expr2010305 | |||||||||
Expr2028549 | |||||||||
Drives_construct | WBCnstr00037372 | ||||||||
Construct_product | WBCnstr00037372 | ||||||||
Microarray_results (16) | |||||||||
Expression_cluster (85) | |||||||||
Interaction (28) | |||||||||
Map_info | Map | IV | Position | -16.033 | Error | 0.03954 | |||
Positive | Positive_clone | Y41D4A | Inferred_automatically | From CDS info | |||||
From sequence, transcript, pseudogene data | |||||||||
Pseudo_map_position | |||||||||
Reference | WBPaper00038491 | ||||||||
WBPaper00055090 | |||||||||
WBPaper00065080 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |