WormBase Tree Display for Gene: WBGene00000687
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WBGene00000687 | Evidence | Person_evidence | WBPerson345 | ||||||
---|---|---|---|---|---|---|---|---|---|
WBPerson651 | |||||||||
SMap | S_parent | Sequence | C34D4 | ||||||
Identity | Version | 1 | |||||||
Name | CGC_name | col-113 | Person_evidence | WBPerson345 | |||||
Sequence_name | C34D4.15 | ||||||||
Molecular_name | C34D4.15a | ||||||||
C34D4.15a.1 | |||||||||
CE17509 | |||||||||
C34D4.15b | |||||||||
CE48251 | |||||||||
C34D4.15b.1 | |||||||||
Other_name | CELE_C34D4.15 | Accession_evidence | NDB | BX284604 | |||||
Public_name | col-113 | ||||||||
DB_info | Database | AceView | gene | 4H916 | |||||
WormQTL | gene | WBGene00000687 | |||||||
WormFlux | gene | WBGene00000687 | |||||||
NDB | locus_tag | CELE_C34D4.15 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00000687|UniProtKB=Q18450 | |||||||
family | PTHR24637 | ||||||||
NCBI | gene | 177487 | |||||||
RefSeq | protein | NM_068722.8 | |||||||
NM_001307298.2 | |||||||||
TrEMBL | UniProtAcc | M1ZJS7 | |||||||
Q18450 | |||||||||
UniProt_GCRP | UniProtAcc | Q18450 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:21 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | col | ||||||||
Allele (20) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00024294 | ||||||||
00024295 | |||||||||
00024296 | |||||||||
00107680 | |||||||||
Ortholog (31) | |||||||||
Paralog (162) | |||||||||
Structured_description | Automated_description | Predicted to be a structural constituent of cuticle. Predicted to be located in membrane. Predicted to be part of collagen trimer. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | C34D4.15a | |||||||
C34D4.15b | |||||||||
Corresponding_transcript | C34D4.15a.1 | ||||||||
C34D4.15b.1 | |||||||||
Other_sequence (19) | |||||||||
Associated_feature | WBsf651892 | ||||||||
WBsf996903 | |||||||||
WBsf996904 | |||||||||
WBsf230225 | |||||||||
Experimental_info | RNAi_result | WBRNAi00041873 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00011597 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00033412 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1011560 | ||||||||
Expr1030410 | |||||||||
Expr1145890 | |||||||||
Expr2010310 | |||||||||
Expr2028554 | |||||||||
Drives_construct | WBCnstr00037369 | ||||||||
Construct_product | WBCnstr00037369 | ||||||||
Microarray_results (19) | |||||||||
Expression_cluster (245) | |||||||||
Interaction (126) | |||||||||
Map_info | Map | IV | Position | 3.29096 | Error | 7.5e-05 | |||
Positive | Positive_clone | C34D4 | Inferred_automatically | From CDS info | |||||
From sequence, transcript, pseudogene data | |||||||||
Pseudo_map_position | |||||||||
Reference | WBPaper00025192 | ||||||||
WBPaper00038491 | |||||||||
WBPaper00055090 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |