WormBase Tree Display for Gene: WBGene00000681
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| WBGene00000681 | Evidence | Person_evidence | WBPerson345 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| WBPerson651 | |||||||||
| SMap | S_parent | Sequence | C34H4 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | col-107 | Person_evidence | WBPerson345 | |||||
| Sequence_name | C34H4.4 | ||||||||
| Molecular_name | C34H4.4 | ||||||||
| C34H4.4.1 | |||||||||
| CE20539 | |||||||||
| Other_name | CELE_C34H4.4 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | col-107 | ||||||||
| DB_info | Database | AceView | gene | 4C313 | |||||
| WormQTL | gene | WBGene00000681 | |||||||
| WormFlux | gene | WBGene00000681 | |||||||
| NDB | locus_tag | CELE_C34H4.4 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00000681|UniProtKB=Q86S35 | |||||||
| family | PTHR24637 | ||||||||
| NCBI | gene | 176961 | |||||||
| RefSeq | protein | NM_182305.4 | |||||||
| TrEMBL | UniProtAcc | Q86S35 | |||||||
| UniProt_GCRP | UniProtAcc | Q86S35 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:21 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | col | ||||||||
| Allele (26) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00083537 | ||||||||
| 00083538 | |||||||||
| 00083539 | |||||||||
| 00107675 | |||||||||
| Ortholog (31) | |||||||||
| Paralog (170) | |||||||||
| Structured_description | Automated_description | Predicted to be a structural constituent of cuticle. Predicted to be located in membrane. Predicted to be part of collagen trimer. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C34H4.4 | |||||||
| Corresponding_CDS_history | C34H4.4a:wp261 | ||||||||
| Corresponding_transcript | C34H4.4.1 | ||||||||
| Other_sequence (43) | |||||||||
| Associated_feature | WBsf645795 | ||||||||
| WBsf659925 | |||||||||
| WBsf227946 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00041939 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00011636 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00000503 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00029557 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1012212 | ||||||||
| Expr1030405 | |||||||||
| Expr1145946 | |||||||||
| Expr2010304 | |||||||||
| Expr2028548 | |||||||||
| Drives_construct | WBCnstr00037373 | ||||||||
| Construct_product | WBCnstr00037373 | ||||||||
| Microarray_results (26) | |||||||||
| Expression_cluster (275) | |||||||||
| Interaction (85) | |||||||||
| Map_info | Map | IV | Position | -18.2932 | Error | 0.044916 | |||
| Positive | Positive_clone | C34H4 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00025192 | ||||||||
| WBPaper00031097 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
