WormBase Tree Display for Gene: WBGene00000641
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| WBGene00000641 | Evidence | Person_evidence | WBPerson345 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| WBPerson651 | |||||||||
| SMap | S_parent | Sequence | K08C9 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | col-65 | Person_evidence | WBPerson345 | |||||
| Sequence_name | K08C9.4 | ||||||||
| Molecular_name | K08C9.4 | ||||||||
| K08C9.4.1 | |||||||||
| CE18860 | |||||||||
| Other_name | CELE_K08C9.4 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | col-65 | ||||||||
| DB_info | Database | AceView | gene | 1M82 | |||||
| WormQTL | gene | WBGene00000641 | |||||||
| WormFlux | gene | WBGene00000641 | |||||||
| NDB | locus_tag | CELE_K08C9.4 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00000641|UniProtKB=Q9XUT4 | |||||||
| family | PTHR24637 | ||||||||
| NCBI | gene | 187138 | |||||||
| RefSeq | protein | NM_060535.3 | |||||||
| TREEFAM | TREEFAM_ID | TF316783 | |||||||
| TrEMBL | UniProtAcc | Q9XUT4 | |||||||
| UniProt_GCRP | UniProtAcc | Q9XUT4 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:21 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | col | ||||||||
| Allele (38) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00102086 | ||||||||
| 00102087 | |||||||||
| 00107642 | |||||||||
| Ortholog (39) | |||||||||
| Paralog (170) | |||||||||
| Structured_description | Automated_description | Predicted to be a structural constituent of cuticle. Predicted to be part of collagen trimer. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | K08C9.4 | |||||||
| Corresponding_transcript | K08C9.4.1 | ||||||||
| Other_sequence (12) | |||||||||
| Associated_feature | WBsf649625 | ||||||||
| WBsf717578 | |||||||||
| WBsf220347 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00050243 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00034115 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1024099 | ||||||||
| Expr1030378 | |||||||||
| Expr1153939 | |||||||||
| Expr2010415 | |||||||||
| Expr2028656 | |||||||||
| Drives_construct | WBCnstr00037404 | ||||||||
| Construct_product | WBCnstr00037404 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (287) | |||||||||
| Interaction (115) | |||||||||
| Map_info | Map | I | Position | 8.94645 | Error | 0.050715 | |||
| Positive | Positive_clone | K08C9 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
