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WormBase Tree Display for CDS: K08C9.4

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Name Class

K08C9.4EvidenceInferred_automaticallymake_isoforms.pl
SMapS_parentSequenceK08C9
StructureSource_exons1138
197347
7151331
DB_infoDatabaseTrEMBLUniProtAccQ9XUT4
UniProtUniProtAccQ9XUT4
UniProt_GCRPUniProtAccQ9XUT4
AlphaFoldentryQ9XUT4
NCBI_proteinGI_numberGI:3924815
TREEFAMTREEFAM_IDTF316783
Protein_idCHROMOSOME_ICAB045871
DB_remarkCOL-65 protein; contains similarity to Pfam domains PF01391 (Collagen triple helix repeat (20 copies)), PF01484 (Nematode cuticle collagen N-terminal domain); contains similarity to Interpro domains IPR002486 (Nematode cuticle collagen, N-terminal), IPR008160 (Collagen triple helix repeat)
OriginFrom_laboratoryHX
SpeciesCaenorhabditis elegans
PropertiesCodingCDS
Prediction_statusConfirmed
VisibleGeneWBGene00000641
Corresponding_transcriptK08C9.4.1
Corresponding_proteinCE18860
Corresponding_PCR_productcenix:135-h11
mv_K08C9.4
sjj2_K08C9.4
sjj_K08C9.4
Corresponding_oligo_set (18)
Matching_cDNA (33)
RNAi_resultWBRNAi00050243
WBRNAi00034115
Microarray_results (19)
Brief_identificationNematode cuticle collagen N-terminal domain-containing proteinAccession_evidenceUniProtTR:Q9XUT4
RNASeq_FPKM (74)
Methodcurated