WormBase Tree Display for Gene: WBGene00000666
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| WBGene00000666 | Evidence | Person_evidence | WBPerson345 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| WBPerson651 | |||||||||
| SMap | S_parent | Sequence | F09G8 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | col-91 | Person_evidence | WBPerson345 | |||||
| Sequence_name | F09G8.6 | ||||||||
| Molecular_name | F09G8.6 | ||||||||
| F09G8.6.1 | |||||||||
| CE00141 | |||||||||
| Other_name | CELE_F09G8.6 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | col-91 | ||||||||
| DB_info | Database | AceView | gene | 3J348 | |||||
| WormQTL | gene | WBGene00000666 | |||||||
| WormFlux | gene | WBGene00000666 | |||||||
| NDB | locus_tag | CELE_F09G8.6 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00000666|UniProtKB=P34391 | |||||||
| family | PTHR24637 | ||||||||
| NCBI | gene | 184269 | |||||||
| RefSeq | protein | NM_066413.7 | |||||||
| SwissProt | UniProtAcc | P34391 | |||||||
| TREEFAM | TREEFAM_ID | TF316783 | |||||||
| UniProt_GCRP | UniProtAcc | P34391 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:21 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | col | ||||||||
| Allele (27) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00042107 | ||||||||
| 00042108 | |||||||||
| 00042109 | |||||||||
| 00107661 | |||||||||
| Ortholog (27) | |||||||||
| Paralog (170) | |||||||||
| Structured_description | Concise_description | col-91 encodes a cuticle collagen; loss of col-91 via large-scale RNAi results in no obvious defects. | Curator_confirmed | WBPerson1843 | |||||
| Date_last_updated | 29 Mar 2007 00:00:00 | ||||||||
| Automated_description | Predicted to be a structural constituent of cuticle. Predicted to be part of collagen trimer. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F09G8.6 | |||||||
| Corresponding_transcript | F09G8.6.1 | ||||||||
| Other_sequence (11) | |||||||||
| Associated_feature | WBsf227101 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00005190 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00013018 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00030735 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00044189 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00044186 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00005582 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00084741 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1011847 | ||||||||
| Expr1030393 | |||||||||
| Expr1148147 | |||||||||
| Expr2010438 | |||||||||
| Expr2028678 | |||||||||
| Drives_construct | WBCnstr00037385 | ||||||||
| Construct_product | WBCnstr00037385 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (263) | |||||||||
| Interaction (141) | |||||||||
| Map_info | Map | III | Position | -0.352092 | Error | 0.000171 | |||
| Positive | Positive_clone | F09G8 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
