WormBase Tree Display for Gene: WBGene00000742
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| WBGene00000742 | Evidence | Person_evidence | WBPerson345 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| WBPerson651 | |||||||||
| SMap | S_parent | Sequence | T10E10 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | col-169 | Person_evidence | WBPerson345 | |||||
| Sequence_name | T10E10.5 | ||||||||
| Molecular_name | T10E10.5 | ||||||||
| T10E10.5.1 | |||||||||
| CE25990 | |||||||||
| Other_name | T10E10.f | Curator_confirmed | WBPerson1983 | ||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| CELE_T10E10.5 | Accession_evidence | NDB | BX284606 | ||||||
| Public_name | col-169 | ||||||||
| DB_info | Database | AceView | gene | XG949 | |||||
| WormQTL | gene | WBGene00000742 | |||||||
| WormFlux | gene | WBGene00000742 | |||||||
| NDB | locus_tag | CELE_T10E10.5 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00000742|UniProtKB=Q86NE4 | |||||||
| family | PTHR24637 | ||||||||
| NCBI | gene | 180909 | |||||||
| RefSeq | protein | NM_182455.8 | |||||||
| TrEMBL | UniProtAcc | Q86NE4 | |||||||
| UniProt_GCRP | UniProtAcc | Q86NE4 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:21 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | col | ||||||||
| Allele (16) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00083492 | ||||||||
| 00083493 | |||||||||
| 00083494 | |||||||||
| 00107729 | |||||||||
| Ortholog (66) | |||||||||
| Paralog (163) | |||||||||
| Structured_description | Automated_description | Predicted to be a structural constituent of cuticle. Predicted to be located in membrane. Predicted to be part of collagen trimer. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T10E10.5 | |||||||
| Corresponding_transcript | T10E10.5.1 | ||||||||
| Other_sequence (45) | |||||||||
| Associated_feature | WBsf1005554 | ||||||||
| WBsf235829 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00026228 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr1027500 | ||||||||
| Expr1030452 | |||||||||
| Expr1156655 | |||||||||
| Expr2010363 | |||||||||
| Expr2028607 | |||||||||
| Drives_construct | WBCnstr00037316 | ||||||||
| Construct_product | WBCnstr00037316 | ||||||||
| Microarray_results | SMD_T10E10.2 | ||||||||
| 172735_x_at | |||||||||
| 172736_x_at | |||||||||
| 172746_x_at | |||||||||
| A_12_P107047 | |||||||||
| GPL14144_T10E10.5_9-68_0.653_8_A | |||||||||
| GPL8304_CE_WBGene00000742_A | |||||||||
| GPL8673_T10E10_5P00009 | |||||||||
| GPL8673_T10E10_5P00021 | |||||||||
| GPL8673_T10E10_5P00046 | |||||||||
| Expression_cluster (292) | |||||||||
| Interaction (14) | |||||||||
| Map_info | Map | X | Position | -3.06961 | |||||
| Positive | Positive_clone | T10E10 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
