WormBase Tree Display for Gene: WBGene00000668
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| WBGene00000668 | Evidence | Person_evidence | WBPerson345 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| WBPerson651 | |||||||||
| SMap | S_parent | Sequence | W05B2 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | col-93 | Person_evidence | WBPerson345 | |||||
| Sequence_name | W05B2.5 | ||||||||
| Molecular_name | W05B2.5 | ||||||||
| W05B2.5.1 | |||||||||
| CE20147 | |||||||||
| Other_name | CELE_W05B2.5 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | col-93 | ||||||||
| DB_info | Database | AceView | gene | 3M74 | |||||
| WormQTL | gene | WBGene00000668 | |||||||
| WormFlux | gene | WBGene00000668 | |||||||
| NDB | locus_tag | CELE_W05B2.5 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00000668|UniProtKB=Q9U348 | |||||||
| family | PTHR24637 | ||||||||
| NCBI | gene | 259335 | |||||||
| RefSeq | protein | NM_001382993.2 | |||||||
| TrEMBL | UniProtAcc | Q9U348 | |||||||
| UniProt_GCRP | UniProtAcc | Q9U348 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:21 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | col | ||||||||
| Allele (24) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00099946 | ||||||||
| 00099947 | |||||||||
| 00099948 | |||||||||
| 00107663 | |||||||||
| Ortholog (63) | |||||||||
| Paralog (163) | |||||||||
| Structured_description | Automated_description | Predicted to be a structural constituent of cuticle. Predicted to be located in membrane. Predicted to be part of collagen trimer. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | W05B2.5 | |||||||
| Corresponding_transcript | W05B2.5.1 | ||||||||
| Other_sequence (23) | |||||||||
| Associated_feature | WBsf994220 | ||||||||
| WBsf227538 | |||||||||
| Experimental_info | RNAi_result (28) | ||||||||
| Expr_pattern | Expr1030394 | ||||||||
| Expr1158354 | |||||||||
| Expr2010440 | |||||||||
| Expr2028680 | |||||||||
| Drives_construct | WBCnstr00015936 | ||||||||
| WBCnstr00017255 | |||||||||
| WBCnstr00037383 | |||||||||
| WBCnstr00038500 | |||||||||
| Construct_product | WBCnstr00037383 | ||||||||
| Microarray_results (12) | |||||||||
| Expression_cluster (299) | |||||||||
| Interaction (100) | |||||||||
| Map_info | Map | III | Position | 5.81063 | |||||
| Positive | Positive_clone | W05B2 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00025192 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00057312 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| [200811 gw3] Modified Map position as it was a reverse physical that could not be fixed by automated methods. (5.80129) | |||||||||
| Method | Gene |
