WormBase Tree Display for Gene: WBGene00000689
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| WBGene00000689 | Evidence | Person_evidence | WBPerson345 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| WBPerson651 | |||||||||
| SMap | S_parent | Sequence | Y42H9B | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | col-115 | Person_evidence | WBPerson345 | |||||
| Sequence_name | Y42H9B.1 | ||||||||
| Molecular_name | Y42H9B.1 | ||||||||
| Y42H9B.1.1 | |||||||||
| CE25281 | |||||||||
| Other_name | Y42H9B.c | Curator_confirmed | WBPerson1983 | ||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| CELE_Y42H9B.1 | Accession_evidence | NDB | BX284604 | ||||||
| Public_name | col-115 | ||||||||
| DB_info | Database | AceView | gene | 4I753 | |||||
| WormQTL | gene | WBGene00000689 | |||||||
| WormFlux | gene | WBGene00000689 | |||||||
| NDB | locus_tag | CELE_Y42H9B.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00000689|UniProtKB=Q9N3X9 | |||||||
| family | PTHR24023 | ||||||||
| NCBI | gene | 189843 | |||||||
| RefSeq | protein | NM_068937.3 | |||||||
| TrEMBL | UniProtAcc | Q9N3X9 | |||||||
| UniProt_GCRP | UniProtAcc | Q9N3X9 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:21 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | col | ||||||||
| Allele (54) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00094077 | ||||||||
| 00094078 | |||||||||
| Ortholog (29) | |||||||||
| Paralog (162) | |||||||||
| Structured_description | Automated_description | Predicted to be located in membrane. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y42H9B.1 | |||||||
| Corresponding_transcript | Y42H9B.1.1 | ||||||||
| Other_sequence | CR10527 | ||||||||
| CRC06954_1 | |||||||||
| Associated_feature | WBsf228613 | ||||||||
| WBsf228614 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00037028 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00056448 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00056449 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1024950 | ||||||||
| Expr1030412 | |||||||||
| Expr1159923 | |||||||||
| Expr2010312 | |||||||||
| Expr2028556 | |||||||||
| Drives_construct | WBCnstr00037367 | ||||||||
| Construct_product | WBCnstr00037367 | ||||||||
| Microarray_results (17) | |||||||||
| Expression_cluster (195) | |||||||||
| Interaction | WBInteraction000553288 | ||||||||
| Map_info | Map | IV | Position | 3.57353 | Error | 0.001341 | |||
| Positive | Positive_clone | Y42H9B | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00064788 | ||||||||
| WBPaper00065080 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
