WormBase Tree Display for Gene: WBGene00000707
expand all nodes | collapse all nodes | view schema
| WBGene00000707 | Evidence | Person_evidence | WBPerson345 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| WBPerson651 | |||||||||
| SMap | S_parent | Sequence | F52B11 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | col-133 | Person_evidence | WBPerson345 | |||||
| Sequence_name | F52B11.4 | ||||||||
| Molecular_name | F52B11.4 | ||||||||
| F52B11.4.1 | |||||||||
| CE18724 | |||||||||
| Other_name | CELE_F52B11.4 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | col-133 | ||||||||
| DB_info | Database | AceView | gene | 4O860 | |||||
| WormQTL | gene | WBGene00000707 | |||||||
| WormFlux | gene | WBGene00000707 | |||||||
| NDB | locus_tag | CELE_F52B11.4 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00000707|UniProtKB=Q9XUE9 | |||||||
| family | PTHR24637 | ||||||||
| NCBI | gene | 186083 | |||||||
| RefSeq | protein | NM_070299.3 | |||||||
| TrEMBL | UniProtAcc | Q9XUE9 | |||||||
| UniProt_GCRP | UniProtAcc | Q9XUE9 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:21 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | col | ||||||||
| Allele (27) | |||||||||
| Strain | WBStrain00049352 | ||||||||
| WBStrain00055292 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00101731 | ||||||||
| 00101732 | |||||||||
| 00101733 | |||||||||
| 00107697 | |||||||||
| Ortholog (62) | |||||||||
| Paralog (163) | |||||||||
| Structured_description | Automated_description | Predicted to be a structural constituent of cuticle. Predicted to be located in membrane. Predicted to be part of collagen trimer. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F52B11.4 | |||||||
| Corresponding_transcript | F52B11.4.1 | ||||||||
| Other_sequence (14) | |||||||||
| Associated_feature | WBsf231184 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00025563 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00032581 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00047916 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00015365 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00027355 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00066631 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00025564 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1020589 | ||||||||
| Expr1030426 | |||||||||
| Expr1151746 | |||||||||
| Expr2010329 | |||||||||
| Expr2028573 | |||||||||
| Drives_construct | WBCnstr00037350 | ||||||||
| Construct_product | WBCnstr00037350 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (275) | |||||||||
| Interaction (144) | |||||||||
| Map_info | Map | IV | Position | 11.4364 | Error | 0.006614 | |||
| Positive | Positive_clone | F52B11 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00025192 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00064727 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
