WormBase Tree Display for Gene: WBGene00000712

WBGene00000712 Evidence: Person_evidence: WBPerson345
      WBPerson651
  SMap: S_parent: Sequence: F41F3
  Identity: Version: 1
    Name: CGC_name: col-139 Person_evidence: WBPerson345
      Sequence_name: F41F3.4
      Molecular_name: F41F3.4
        F41F3.4.1
        CE07218
      Other_name: CELE_F41F3.4 Accession_evidence: NDB BX284605
      Public_name: col-139
    DB_info: Database: AceView gene 5F132
        WormQTL gene WBGene00000712
        WormFlux gene WBGene00000712
        NDB locus_tag CELE_F41F3.4
        Panther gene CAEEL|WormBase=WBGene00000712|UniProtKB=Q20282
          family PTHR24637
        NCBI gene 178857
        RefSeq protein NM_071851.6
        TrEMBL UniProtAcc Q20282
        UniProt_GCRP UniProtAcc Q20282
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:21 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: col
    Allele (34)
    Strain: WBStrain00050974
    RNASeq_FPKM (74)
    GO_annotation: 00067682
      00067683
      00067684
      00107700
    Ortholog: WBGene00058024 Caenorhabditis remanei From_analysis: OMA
            TreeFam
            Inparanoid_8
      WBGene00030515 Caenorhabditis briggsae From_analysis: OrthoMCL
            OMA
            Inparanoid_8
            WormBase-Compara
      WBGene00128470 Caenorhabditis japonica From_analysis: TreeFam
            Inparanoid_8
            WormBase-Compara
      WBGene00090882 Pristionchus pacificus From_analysis: OMA
      WBGene00100342 Pristionchus pacificus From_analysis: OMA
      CSP31.g9860 Caenorhabditis uteleia From_analysis: WormBase-Compara
      CSP38.g20763 Caenorhabditis quiockensis From_analysis: WormBase-Compara
      Cni-col-139 Caenorhabditis nigoni From_analysis: WormBase-Compara
    Paralog (163)
    Structured_description: Automated_description: Predicted to be a structural constituent of cuticle. Predicted to be located in membrane. Predicted to be part of collagen trimer. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F41F3.4
    Corresponding_transcript: F41F3.4.1
    Other_sequence (23)
    Associated_feature: WBsf999845
      WBsf999846
      WBsf233598
  Experimental_info: RNAi_result: WBRNAi00027331 Inferred_automatically: RNAi_primary
      WBRNAi00014763 Inferred_automatically: RNAi_primary
      WBRNAi00047011 Inferred_automatically: RNAi_primary
      WBRNAi00025465 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1022409
      Expr1030430
      Expr1150876
      Expr2010332
      Expr2028576
    Drives_construct: WBCnstr00037346
    Construct_product: WBCnstr00037346
    Microarray_results (18)
    Expression_cluster (320)
    Interaction (83)
  Map_info: Map: V Position: -4.81296 Error: 0.003939
    Positive: Positive_clone: F41F3 Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00059205
    WBPaper00065859
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene