WormBase Tree Display for Gene: WBGene00000672

WBGene00000672 Evidence: Person_evidence: WBPerson345
      WBPerson651
  SMap: S_parent: Sequence: ZK1010
  Identity: Version: 1
    Name: CGC_name: col-97 Person_evidence: WBPerson345
      Sequence_name: ZK1010.7
      Molecular_name: ZK1010.7
        ZK1010.7.1
        CE15507
      Other_name: CELE_ZK1010.7 Accession_evidence: NDB BX284603
      Public_name: col-97
    DB_info: Database: AceView gene 3O82
        WormQTL gene WBGene00000672
        WormFlux gene WBGene00000672
        NDB locus_tag CELE_ZK1010.7
        Panther gene CAEEL|WormBase=WBGene00000672|UniProtKB=O18286
          family PTHR24637
        NCBI gene 176721
        RefSeq protein NM_067299.4
        TrEMBL UniProtAcc O18286
        UniProt_GCRP UniProtAcc O18286
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:21 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: col
    Allele (19)
    RNASeq_FPKM (74)
    GO_annotation: 00031921
      00031922
      00031923
      00107667
    Ortholog (28)
    Paralog (163)
    Structured_description: Concise_description: col-97 encodes a cuticular collagen; loss of col-97 activity via large-scale RNAi screens results in defects in body morphology and locomotion. Paper_evidence: WBPaper00027067
          Curator_confirmed: WBPerson1843
          Date_last_updated: 27 Mar 2007 00:00:00
      Automated_description: Predicted to be a structural constituent of cuticle. Predicted to be located in membrane. Predicted to be part of collagen trimer. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: ZK1010.7
    Corresponding_transcript: ZK1010.7.1
    Other_sequence (99)
    Associated_feature: WBsf651563
      WBsf227706
      WBsf227707
      WBsf227708
  Experimental_info: RNAi_result: WBRNAi00006722 Inferred_automatically: RNAi_primary
      WBRNAi00027024 Inferred_automatically: RNAi_primary
      WBRNAi00021770 Inferred_automatically: RNAi_primary
      WBRNAi00059040 Inferred_automatically: RNAi_primary
      WBRNAi00059039 Inferred_automatically: RNAi_primary
      WBRNAi00027554 Inferred_automatically: RNAi_primary
      WBRNAi00006091 Inferred_automatically: RNAi_primary
      WBRNAi00038111 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1027990
      Expr1030397
      Expr1162469
      Expr2010444
      Expr2028684
    Drives_construct: WBCnstr00037381
    Construct_product: WBCnstr00037381
    Microarray_results (28)
    Expression_cluster (364)
    Interaction (164)
  Map_info: Map: III Position: 20.7087 Error: 0.003802
    Positive: Positive_clone: ZK1010 Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00025192
    WBPaper00027067
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene