WormBase Tree Display for Gene: WBGene00000672
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| WBGene00000672 | Evidence | Person_evidence | WBPerson345 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| WBPerson651 | |||||||||
| SMap | S_parent | Sequence | ZK1010 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | col-97 | Person_evidence | WBPerson345 | |||||
| Sequence_name | ZK1010.7 | ||||||||
| Molecular_name | ZK1010.7 | ||||||||
| ZK1010.7.1 | |||||||||
| CE15507 | |||||||||
| Other_name | CELE_ZK1010.7 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | col-97 | ||||||||
| DB_info | Database | AceView | gene | 3O82 | |||||
| WormQTL | gene | WBGene00000672 | |||||||
| WormFlux | gene | WBGene00000672 | |||||||
| NDB | locus_tag | CELE_ZK1010.7 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00000672|UniProtKB=O18286 | |||||||
| family | PTHR24637 | ||||||||
| NCBI | gene | 176721 | |||||||
| RefSeq | protein | NM_067299.4 | |||||||
| TrEMBL | UniProtAcc | O18286 | |||||||
| UniProt_GCRP | UniProtAcc | O18286 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:21 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | col | ||||||||
| Allele (19) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00031921 | ||||||||
| 00031922 | |||||||||
| 00031923 | |||||||||
| 00107667 | |||||||||
| Ortholog (28) | |||||||||
| Paralog (163) | |||||||||
| Structured_description | Concise_description | col-97 encodes a cuticular collagen; loss of col-97 activity via large-scale RNAi screens results in defects in body morphology and locomotion. | Paper_evidence | WBPaper00027067 | |||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 27 Mar 2007 00:00:00 | ||||||||
| Automated_description | Predicted to be a structural constituent of cuticle. Predicted to be located in membrane. Predicted to be part of collagen trimer. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | ZK1010.7 | |||||||
| Corresponding_transcript | ZK1010.7.1 | ||||||||
| Other_sequence | CK855421.1 | ||||||||
| BMC12422_1 | |||||||||
| EX009586.1 | |||||||||
| BE552489.1 | |||||||||
| AI132751.1 | |||||||||
| AI692128.1 | |||||||||
| HBC20113_1 | |||||||||
| BF400423.1 | |||||||||
| CJC12196_1 | |||||||||
| HCC07165_1 | |||||||||
| SRC05338_1 | |||||||||
| HBC01962_1 | |||||||||
| BG310584.1 | |||||||||
| CK726288.1 | |||||||||
| OVC00734_1 | |||||||||
| AW562096.1 | |||||||||
| JI470861.1 | |||||||||
| BMC05537_1 | |||||||||
| BF718915.1 | |||||||||
| AA293975.1 | |||||||||
| HC05500 | |||||||||
| JI179242.1 | |||||||||
| OVC04069_1 | |||||||||
| WBC01544_1 | |||||||||
| FC817267.1 | |||||||||
| AA618912.1 | |||||||||
| CRC00188_1 | |||||||||
| BMC14084_1 | |||||||||
| Dviv_isotig25089 | |||||||||
| ACC19321_1 | |||||||||
| ACC35872_1 | |||||||||
| AW208361.1 | |||||||||
| MJC01481_1 | |||||||||
| CK854786.1 | |||||||||
| CJC03055_1 | |||||||||
| BF918266.1 | |||||||||
| AW355818.1 | |||||||||
| AA294693.1 | |||||||||
| AI205425.1 | |||||||||
| ES738998.1 | |||||||||
| AI665804.1 | |||||||||
| Hbac_isotig04171 | |||||||||
| CK726276.1 | |||||||||
| AW257737.1 | |||||||||
| PPC00112_1 | |||||||||
| EX542454.1 | |||||||||
| BE346040.1 | |||||||||
| ES410873.1 | |||||||||
| EW743166.1 | |||||||||
| EX007753.1 | |||||||||
| EX009363.1 | |||||||||
| JO473624.1 | |||||||||
| TX00097 | |||||||||
| ES743440.1 | |||||||||
| AW355824.1 | |||||||||
| MJ00293 | |||||||||
| AW244826.1 | |||||||||
| BF918242.1 | |||||||||
| PP01196 | |||||||||
| BMC03726_1 | |||||||||
| AS10450 | |||||||||
| ES739010.1 | |||||||||
| BF727570.1 | |||||||||
| AI665756.1 | |||||||||
| JI176434.1 | |||||||||
| DN190791.1 | |||||||||
| CK850672.1 | |||||||||
| BM00262 | |||||||||
| AI253475.1 | |||||||||
| AA756888.1 | |||||||||
| CK855108.1 | |||||||||
| EX011074.1 | |||||||||
| CJC02720_1 | |||||||||
| TCC00973_1 | |||||||||
| ES414095.1 | |||||||||
| CK726393.1 | |||||||||
| CR01886 | |||||||||
| GO239339.1 | |||||||||
| AA680426.1 | |||||||||
| CK855031.1 | |||||||||
| AA294689.1 | |||||||||
| BF228725.1 | |||||||||
| EX915654.1 | |||||||||
| AA657345.1 | |||||||||
| BMC06840_1 | |||||||||
| CK850692.1 | |||||||||
| EX913562.1 | |||||||||
| CK855381.1 | |||||||||
| WBC01467_1 | |||||||||
| HBC00267_1 | |||||||||
| OVC00753_1 | |||||||||
| BF918174.1 | |||||||||
| ASC02280_1 | |||||||||
| BF824689.1 | |||||||||
| WBC01463_1 | |||||||||
| EX915505.1 | |||||||||
| EX911992.1 | |||||||||
| AS10469 | |||||||||
| OVC09056_1 | |||||||||
| Associated_feature | WBsf651563 | ||||||||
| WBsf227706 | |||||||||
| WBsf227707 | |||||||||
| WBsf227708 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00006722 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00027024 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00021770 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00059040 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00059039 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00027554 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00006091 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00038111 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1027990 | ||||||||
| Expr1030397 | |||||||||
| Expr1162469 | |||||||||
| Expr2010444 | |||||||||
| Expr2028684 | |||||||||
| Drives_construct | WBCnstr00037381 | ||||||||
| Construct_product | WBCnstr00037381 | ||||||||
| Microarray_results (28) | |||||||||
| Expression_cluster (364) | |||||||||
| Interaction (164) | |||||||||
| Map_info | Map | III | Position | 20.7087 | Error | 0.003802 | |||
| Positive | Positive_clone | ZK1010 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00025192 | ||||||||
| WBPaper00027067 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
