WormBase Tree Display for Gene: WBGene00000678
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| WBGene00000678 | Evidence | Person_evidence | WBPerson345 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| WBPerson651 | |||||||||
| SMap | S_parent | Sequence | F58F6 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | col-104 | Person_evidence | WBPerson345 | |||||
| Sequence_name | F58F6.1 | ||||||||
| Molecular_name | F58F6.1 | ||||||||
| F58F6.1.1 | |||||||||
| CE17136 | |||||||||
| Other_name | CELE_F58F6.1 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | col-104 | ||||||||
| DB_info | Database | AceView | gene | 4C118 | |||||
| WormQTL | gene | WBGene00000678 | |||||||
| WormFlux | gene | WBGene00000678 | |||||||
| NDB | locus_tag | CELE_F58F6.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00000678|UniProtKB=O44174 | |||||||
| family | PTHR24637 | ||||||||
| NCBI | gene | 176947 | |||||||
| RefSeq | protein | NM_067669.5 | |||||||
| TREEFAM | TREEFAM_ID | TF316943 | |||||||
| TrEMBL | UniProtAcc | O44174 | |||||||
| UniProt_GCRP | UniProtAcc | O44174 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:21 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | col | ||||||||
| Allele (66) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00032144 | ||||||||
| 00032145 | |||||||||
| 00032146 | |||||||||
| 00107672 | |||||||||
| Ortholog (34) | |||||||||
| Paralog (162) | |||||||||
| Structured_description | Automated_description | Predicted to be a structural constituent of cuticle. Predicted to be located in membrane. Predicted to be part of collagen trimer. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F58F6.1 | |||||||
| Corresponding_transcript | F58F6.1.1 | ||||||||
| Other_sequence (16) | |||||||||
| Associated_feature | WBsf667740 | ||||||||
| WBsf995409 | |||||||||
| WBsf1016707 | |||||||||
| WBsf229759 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00033111 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00049020 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00015992 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1029127 | ||||||||
| Expr1030403 | |||||||||
| Expr1152759 | |||||||||
| Expr2010302 | |||||||||
| Expr2028545 | |||||||||
| Drives_construct | WBCnstr00037375 | ||||||||
| Construct_product | WBCnstr00037375 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (322) | |||||||||
| Interaction (172) | |||||||||
| Map_info | Map | IV | Position | -20.0641 | Error | 0.09975 | |||
| Positive | Positive_clone | F58F6 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
