WormBase Tree Display for Gene: WBGene00000670
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| WBGene00000670 | Evidence | Person_evidence | WBPerson345 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| WBPerson651 | |||||||||
| SMap | S_parent | Sequence | Y41C4A | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | col-95 | Person_evidence | WBPerson345 | |||||
| Sequence_name | Y41C4A.16 | ||||||||
| Molecular_name | Y41C4A.16 | ||||||||
| Y41C4A.16.1 | |||||||||
| CE33480 | |||||||||
| Other_name | CELE_Y41C4A.16 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | col-95 | ||||||||
| DB_info | Database | AceView | gene | 3M793 | |||||
| WormQTL | gene | WBGene00000670 | |||||||
| WormFlux | gene | WBGene00000670 | |||||||
| NDB | locus_tag | CELE_Y41C4A.16 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00000670|UniProtKB=Q86MP1 | |||||||
| family | PTHR24637 | ||||||||
| NCBI | gene | 176602 | |||||||
| RefSeq | protein | NM_001383002.2 | |||||||
| TrEMBL | UniProtAcc | Q86MP1 | |||||||
| UniProt_GCRP | UniProtAcc | Q86MP1 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:21 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | col | ||||||||
| Allele (29) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00083446 | ||||||||
| 00083447 | |||||||||
| 00083448 | |||||||||
| 00107665 | |||||||||
| Ortholog (21) | |||||||||
| Paralog (163) | |||||||||
| Structured_description | Concise_description | col-95 encodes a collagen. | Curator_confirmed | WBPerson1843 | |||||
| Date_last_updated | 04 Jan 2013 00:00:00 | ||||||||
| Automated_description | Predicted to be a structural constituent of cuticle. Predicted to be located in membrane. Predicted to be part of collagen trimer. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y41C4A.16 | |||||||
| Corresponding_CDS_history | Y41C4A.16:wp20 | ||||||||
| Corresponding_transcript | Y41C4A.16.1 | ||||||||
| Other_sequence (24) | |||||||||
| Associated_feature | WBsf994471 | ||||||||
| WBsf1016068 | |||||||||
| WBsf225851 | |||||||||
| Experimental_info | Expr_pattern | Expr1023935 | |||||||
| Expr1030395 | |||||||||
| Expr1159842 | |||||||||
| Expr2010442 | |||||||||
| Expr2028682 | |||||||||
| Microarray_results (12) | |||||||||
| Expression_cluster (272) | |||||||||
| Interaction (42) | |||||||||
| Map_info | Map | III | Position | 11.8747 | Error | 0.026567 | |||
| Positive | Positive_clone | Y41C4A | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00025088 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00041771 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00065331 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
