WormBase Tree Display for Gene: WBGene00000669
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| WBGene00000669 | Evidence | Person_evidence | WBPerson345 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| WBPerson651 | |||||||||
| SMap | S_parent | Sequence | W05B2 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | col-94 | Person_evidence | WBPerson345 | |||||
| Sequence_name | W05B2.1 | ||||||||
| Molecular_name | W05B2.1 | ||||||||
| W05B2.1.1 | |||||||||
| CE20144 | |||||||||
| Other_name | CELE_W05B2.1 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | col-94 | ||||||||
| DB_info | Database | AceView | gene | 3M76 | |||||
| WormQTL | gene | WBGene00000669 | |||||||
| WormFlux | gene | WBGene00000669 | |||||||
| NDB | locus_tag | CELE_W05B2.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00000669|UniProtKB=Q9U349 | |||||||
| family | PTHR24637 | ||||||||
| NCBI | gene | 259336 | |||||||
| RefSeq | protein | NM_001382994.2 | |||||||
| TrEMBL | UniProtAcc | Q9U349 | |||||||
| UniProt_GCRP | UniProtAcc | Q9U349 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:21 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | col | ||||||||
| Allele | WBVar00859876 | ||||||||
| WBVar00859877 | |||||||||
| WBVar01500260 | |||||||||
| WBVar01499774 | |||||||||
| WBVar02150586 | |||||||||
| WBVar01499870 | |||||||||
| WBVar01499871 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00099949 | ||||||||
| 00099950 | |||||||||
| 00099951 | |||||||||
| 00107664 | |||||||||
| Ortholog (63) | |||||||||
| Paralog (163) | |||||||||
| Structured_description | Automated_description | Predicted to be a structural constituent of cuticle. Predicted to be located in membrane. Predicted to be part of collagen trimer. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | W05B2.1 | |||||||
| Corresponding_transcript | W05B2.1.1 | ||||||||
| Other_sequence (42) | |||||||||
| Associated_feature | WBsf651491 | ||||||||
| WBsf994221 | |||||||||
| WBsf1015893 | |||||||||
| WBsf227539 | |||||||||
| Experimental_info | RNAi_result (28) | ||||||||
| Expr_pattern | Expr1014014 | ||||||||
| Expr1158351 | |||||||||
| Expr2010441 | |||||||||
| Expr2028681 | |||||||||
| Drives_construct | WBCnstr00037382 | ||||||||
| Construct_product | WBCnstr00037382 | ||||||||
| Microarray_results | SMD_W05B2.1 | ||||||||
| 171756_x_at | |||||||||
| 171770_x_at | |||||||||
| 172197_x_at | |||||||||
| 172209_x_at | |||||||||
| Aff_W05B2.1 | |||||||||
| GPL3518_CE20144 | |||||||||
| GPL8673_W05B2_1P00028 | |||||||||
| Expression_cluster (225) | |||||||||
| Interaction (99) | |||||||||
| Map_info | Map | III | Position | 5.81615 | Error | 0.006137 | |||
| Positive | Positive_clone | W05B2 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00025192 | ||||||||
| WBPaper00028809 | |||||||||
| WBPaper00035598 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00057312 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
