WormBase Tree Display for Gene: WBGene00000669

WBGene00000669 Evidence: Person_evidence: WBPerson345
      WBPerson651
  SMap: S_parent: Sequence: W05B2
  Identity: Version: 1
    Name: CGC_name: col-94 Person_evidence: WBPerson345
      Sequence_name: W05B2.1
      Molecular_name: W05B2.1
        W05B2.1.1
        CE20144
      Other_name: CELE_W05B2.1 Accession_evidence: NDB BX284603
      Public_name: col-94
    DB_info: Database: AceView gene 3M76
        WormQTL gene WBGene00000669
        WormFlux gene WBGene00000669
        NDB locus_tag CELE_W05B2.1
        Panther gene CAEEL|WormBase=WBGene00000669|UniProtKB=Q9U349
          family PTHR24637
        NCBI gene 259336
        RefSeq protein NM_001382994.2
        TrEMBL UniProtAcc Q9U349
        UniProt_GCRP UniProtAcc Q9U349
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:21 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: col
    Allele: WBVar00859876
      WBVar00859877
      WBVar01500260
      WBVar01499774
      WBVar02150586
      WBVar01499870
      WBVar01499871
    RNASeq_FPKM (74)
    GO_annotation: 00099949
      00099950
      00099951
      00107664
    Ortholog (63)
    Paralog (163)
    Structured_description: Automated_description: Predicted to be a structural constituent of cuticle. Predicted to be located in membrane. Predicted to be part of collagen trimer. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: W05B2.1
    Corresponding_transcript: W05B2.1.1
    Other_sequence (42)
    Associated_feature: WBsf651491
      WBsf994221
      WBsf1015893
      WBsf227539
  Experimental_info: RNAi_result (28)
    Expr_pattern: Expr1014014
      Expr1158351
      Expr2010441
      Expr2028681
    Drives_construct: WBCnstr00037382
    Construct_product: WBCnstr00037382
    Microarray_results: SMD_W05B2.1
      171756_x_at
      171770_x_at
      172197_x_at
      172209_x_at
      Aff_W05B2.1
      GPL3518_CE20144
      GPL8673_W05B2_1P00028
    Expression_cluster (225)
    Interaction: WBInteraction000101698
      WBInteraction000101703
      WBInteraction000102245
      WBInteraction000102566
      WBInteraction000103071
      WBInteraction000103306
      WBInteraction000103464
      WBInteraction000103472
      WBInteraction000103825
      WBInteraction000104886
      WBInteraction000104932
      WBInteraction000105208
      WBInteraction000106156
      WBInteraction000106347
      WBInteraction000106599
      WBInteraction000107088
      WBInteraction000107175
      WBInteraction000108794
      WBInteraction000109152
      WBInteraction000109515
      WBInteraction000109886
      WBInteraction000110249
      WBInteraction000110750
      WBInteraction000111014
      WBInteraction000111960
      WBInteraction000112046
      WBInteraction000112058
      WBInteraction000113252
      WBInteraction000113382
      WBInteraction000115178
      WBInteraction000118094
      WBInteraction000118254
      WBInteraction000119728
      WBInteraction000120065
      WBInteraction000120111
      WBInteraction000120544
      WBInteraction000121616
      WBInteraction000125226
      WBInteraction000135008
      WBInteraction000143115
      WBInteraction000144463
      WBInteraction000152530
      WBInteraction000156811
      WBInteraction000164856
      WBInteraction000172438
      WBInteraction000179555
      WBInteraction000183433
      WBInteraction000183474
      WBInteraction000183556
      WBInteraction000185636
      WBInteraction000187772
      WBInteraction000194952
      WBInteraction000207138
      WBInteraction000207217
      WBInteraction000209543
      WBInteraction000210971
      WBInteraction000220021
      WBInteraction000221139
      WBInteraction000222811
      WBInteraction000225483
      WBInteraction000242508
      WBInteraction000245617
      WBInteraction000247115
      WBInteraction000251741
      WBInteraction000254984
      WBInteraction000260945
      WBInteraction000269524
      WBInteraction000275506
      WBInteraction000281165
      WBInteraction000291415
      WBInteraction000295592
      WBInteraction000296321
      WBInteraction000301706
      WBInteraction000303405
      WBInteraction000307116
      WBInteraction000307117
      WBInteraction000307118
      WBInteraction000308275
      WBInteraction000333012
      WBInteraction000346763
      WBInteraction000355988
      WBInteraction000356744
      WBInteraction000361048
      WBInteraction000382631
      WBInteraction000387681
      WBInteraction000389925
      WBInteraction000390047
      WBInteraction000398524
      WBInteraction000399914
      WBInteraction000410829
      WBInteraction000436225
      WBInteraction000436614
      WBInteraction000438242
      WBInteraction000444028
      WBInteraction000452917
      WBInteraction000464447
      WBInteraction000468353
      WBInteraction000468399
      WBInteraction000471926
  Map_info: Map: III Position: 5.81615 Error: 0.006137
    Positive: Positive_clone: W05B2 Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00025192
    WBPaper00028809
    WBPaper00035598
    WBPaper00038491
    WBPaper00055090
    WBPaper00057312
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene