WormBase Tree Display for Gene: WBGene00000706
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| WBGene00000706 | Evidence | Person_evidence | WBPerson345 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| WBPerson651 | |||||||||
| SMap | S_parent | Sequence | C39E9 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | col-132 | Person_evidence | WBPerson345 | |||||
| Sequence_name | C39E9.9 | ||||||||
| Molecular_name | C39E9.9 | ||||||||
| C39E9.9.1 | |||||||||
| CE05392 | |||||||||
| Other_name | CELE_C39E9.9 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | col-132 | ||||||||
| DB_info | Database | AceView | gene | 4N854 | |||||
| WormQTL | gene | WBGene00000706 | |||||||
| WormFlux | gene | WBGene00000706 | |||||||
| NDB | locus_tag | CELE_C39E9.9 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00000706|UniProtKB=Q18536 | |||||||
| family | PTHR24637 | ||||||||
| NCBI | gene | 183347 | |||||||
| RefSeq | protein | NM_070113.3 | |||||||
| TREEFAM | TREEFAM_ID | TF319073 | |||||||
| TrEMBL | UniProtAcc | Q18536 | |||||||
| UniProt_GCRP | UniProtAcc | Q18536 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:21 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | col | ||||||||
| Allele (36) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00061599 | ||||||||
| 00061600 | |||||||||
| 00061601 | |||||||||
| 00107696 | |||||||||
| Ortholog (27) | |||||||||
| Paralog (161) | |||||||||
| Structured_description | Automated_description | Predicted to be a structural constituent of cuticle. Predicted to be located in membrane. Predicted to be part of collagen trimer. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C39E9.9 | |||||||
| Corresponding_transcript | C39E9.9.1 | ||||||||
| Other_sequence | LSC00610_1 | ||||||||
| DN557409.1 | |||||||||
| Associated_feature | WBsf652323 | ||||||||
| WBsf231083 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00042227 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00011794 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00029695 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1015673 | ||||||||
| Expr1030425 | |||||||||
| Expr1146218 | |||||||||
| Expr2010328 | |||||||||
| Expr2028572 | |||||||||
| Drives_construct | WBCnstr00037351 | ||||||||
| Construct_product | WBCnstr00037351 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (62) | |||||||||
| Interaction | WBInteraction000297096 | ||||||||
| WBInteraction000317526 | |||||||||
| WBInteraction000325804 | |||||||||
| WBInteraction000453085 | |||||||||
| Map_info | Map | IV | Position | 7.82751 | Error | 0.010136 | |||
| Positive | Positive_clone | C39E9 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00005747 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
