WormBase Tree Display for Gene: WBGene00000740
expand all nodes | collapse all nodes | view schema
WBGene00000740 | Evidence | Person_evidence | WBPerson345 | ||||||
---|---|---|---|---|---|---|---|---|---|
WBPerson651 | |||||||||
SMap | S_parent | Sequence | T10E10 | ||||||
Identity | Version | 1 | |||||||
Name | CGC_name | col-167 | Person_evidence | WBPerson345 | |||||
Sequence_name | T10E10.2 | ||||||||
Molecular_name | T10E10.2 | ||||||||
T10E10.2.1 | |||||||||
CE23969 | |||||||||
Other_name | T10E10.d | Curator_confirmed | WBPerson1983 | ||||||
Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
CELE_T10E10.2 | Accession_evidence | NDB | BX284606 | ||||||
Public_name | col-167 | ||||||||
DB_info | Database | AceView | gene | XG943 | |||||
WormQTL | gene | WBGene00000740 | |||||||
WormFlux | gene | WBGene00000740 | |||||||
NDB | locus_tag | CELE_T10E10.2 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00000740|UniProtKB=Q22379 | |||||||
family | PTHR24637 | ||||||||
NCBI | gene | 180907 | |||||||
RefSeq | protein | NM_076658.5 | |||||||
TrEMBL | UniProtAcc | Q22379 | |||||||
UniProt_GCRP | UniProtAcc | Q22379 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:21 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | col | ||||||||
Allele (14) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00075125 | ||||||||
00075126 | |||||||||
00075127 | |||||||||
00107727 | |||||||||
Ortholog (66) | |||||||||
Paralog (161) | |||||||||
Structured_description | Automated_description | Predicted to be a structural constituent of cuticle. Predicted to be located in membrane. Predicted to be part of collagen trimer. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | T10E10.2 | |||||||
Corresponding_transcript | T10E10.2.1 | ||||||||
Other_sequence (36) | |||||||||
Associated_feature | WBsf648225 | ||||||||
WBsf235826 | |||||||||
WBsf235827 | |||||||||
Experimental_info | RNAi_result | WBRNAi00035441 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00026228 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1156652 | ||||||||
Expr2010361 | |||||||||
Expr2028605 | |||||||||
Drives_construct | WBCnstr00037318 | ||||||||
Construct_product | WBCnstr00037318 | ||||||||
Microarray_results (13) | |||||||||
Expression_cluster (280) | |||||||||
Interaction (28) | |||||||||
Map_info | Map | X | Position | -3.08761 | |||||
Positive | Positive_clone | T10E10 | Inferred_automatically | From CDS info | |||||
From sequence, transcript, pseudogene data | |||||||||
Pseudo_map_position | |||||||||
Reference | WBPaper00028809 | ||||||||
WBPaper00038491 | |||||||||
WBPaper00055090 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |