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WormBase Tree Display for Gene: WBGene00001076

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Name Class

WBGene00001076EvidencePerson_evidenceWBPerson261
WBPerson2629
SMapS_parentSequenceF54D8
IdentityVersion2
NameCGC_namedpy-17Person_evidenceWBPerson261
Sequence_nameF54D8.1
Molecular_nameF54D8.1
F54D8.1.1
CE11066
Other_nameCELE_F54D8.1Accession_evidenceNDBBX284603
Public_namedpy-17
DB_infoDatabaseAceViewgene3G197
WormQTLgeneWBGene00001076
WormFluxgeneWBGene00001076
NDBlocus_tagCELE_F54D8.1
PanthergeneCAEEL|WormBase=WBGene00001076|UniProtKB=Q20778
familyPTHR24637
NCBIgene175696
RefSeqproteinNM_065685.9
TREEFAMTREEFAM_IDTF321978
TrEMBLUniProtAccQ20778
UniProt_GCRPUniProtAccQ20778
SpeciesCaenorhabditis elegans
HistoryVersion_change102 Jul 2004 16:55:45WBPerson1845EventCreated
202 Jul 2004 16:42:33WBPerson1971EventAcquires_mergeWBGene00018799
Acquires_mergeWBGene00018799
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classdpy
Reference_alleleWBVar00143004
Allele (28)
Legacy_informatione164 : medium dumpy spindle-shaped adult; old adults sometimes less dumpy; strong dumpy L1. ES3 (all stages). ME2. NA7 (e1345ts e905pdi e1295icr etc.).
See also e164, e417, e2145
[C.elegansII] e164 : medium dumpy, spindle-shaped adult; old adults sometimes less dumpy; strong dumpy L1; low penetrance defects in outgrowth of posterior canal cell processes. ES3 (all stages). ME2. OA6: e1345ts, e905pdi, e1295icr, e1345, e2145 etc. [Brenner 1974; NJ]
StrainWBStrain00022516
WBStrain00022521
WBStrain00022524
WBStrain00022526
WBStrain00022539
WBStrain00022766
WBStrain00026585
WBStrain00026641
WBStrain00026646
WBStrain00026647
WBStrain00026665
WBStrain00026667
WBStrain00026695
WBStrain00026739
WBStrain00026741
WBStrain00026751
WBStrain00026752
WBStrain00026753
WBStrain00026755
WBStrain00026756
WBStrain00026757
WBStrain00026803
WBStrain00026964
WBStrain00026977
WBStrain00027060
WBStrain00027068
WBStrain00027085
WBStrain00027095
WBStrain00027111
WBStrain00027139
WBStrain00027181
WBStrain00027202
WBStrain00027244
WBStrain00027313
WBStrain00027327
WBStrain00027607
WBStrain00027608
WBStrain00028985
WBStrain00029348
WBStrain00029349
WBStrain00030879
WBStrain00033370
WBStrain00033506
WBStrain00033910
WBStrain00033911
WBStrain00033912
WBStrain00034244
WBStrain00034477
WBStrain00034478
WBStrain00034484
WBStrain00035109
WBStrain00040210
WBStrain00040418
WBStrain00000753
WBStrain00000754
WBStrain00000755
WBStrain00000756
WBStrain00000757
WBStrain00000758
WBStrain00000759
WBStrain00000760
WBStrain00000761
WBStrain00000762
WBStrain00000763
WBStrain00000764
WBStrain00000765
WBStrain00000766
WBStrain00000767
WBStrain00000768
WBStrain00000769
WBStrain00000770
WBStrain00000771
WBStrain00000772
WBStrain00000773
WBStrain00000774
WBStrain00000775
WBStrain00000776
WBStrain00000777
WBStrain00000778
WBStrain00000779
WBStrain00000780
WBStrain00000781
WBStrain00000782
WBStrain00000783
WBStrain00000784
WBStrain00000785
WBStrain00000786
WBStrain00000787
WBStrain00000788
WBStrain00000789
WBStrain00000790
WBStrain00000791
WBStrain00000792
WBStrain00000793
WBStrain00000794
WBStrain00000795
WBStrain00000796
WBStrain00000797
WBStrain00000798
WBStrain00000799
WBStrain00000800
WBStrain00000801
WBStrain00000802
WBStrain00000803
WBStrain00000804
WBStrain00000805
WBStrain00000806
WBStrain00000807
WBStrain00000808
WBStrain00000809
WBStrain00000810
WBStrain00000811
WBStrain00000812
WBStrain00000813
WBStrain00000814
WBStrain00000829
WBStrain00000831
WBStrain00000844
WBStrain00000846
WBStrain00000856
WBStrain00000861
WBStrain00000862
WBStrain00000863
WBStrain00000864
WBStrain00000865
WBStrain00000866
WBStrain00000867
WBStrain00000868
WBStrain00000869
WBStrain00000870
WBStrain00000871
WBStrain00000872
WBStrain00000873
WBStrain00000874
WBStrain00000875
WBStrain00000876
WBStrain00000877
WBStrain00000878
WBStrain00000879
WBStrain00000880
WBStrain00000881
WBStrain00000882
WBStrain00000883
WBStrain00000884
WBStrain00000885
WBStrain00000886
WBStrain00000887
WBStrain00000888
WBStrain00000889
WBStrain00000890
WBStrain00000891
WBStrain00000892
WBStrain00000893
WBStrain00000894
WBStrain00000895
WBStrain00000896
WBStrain00000897
WBStrain00000898
WBStrain00000899
WBStrain00000900
WBStrain00000901
WBStrain00000902
WBStrain00000903
WBStrain00000904
WBStrain00000905
WBStrain00000906
WBStrain00000907
WBStrain00000908
WBStrain00000909
WBStrain00000910
WBStrain00000911
WBStrain00000912
WBStrain00000913
WBStrain00000941
WBStrain00000962
WBStrain00003987
WBStrain00004005
WBStrain00004292
WBStrain00004305
WBStrain00004115
WBStrain00004687
WBStrain00004688
WBStrain00004752
WBStrain00004949
WBStrain00004976
WBStrain00004995
WBStrain00004996
WBStrain00004998
WBStrain00005231
WBStrain00006390
WBStrain00006436
WBStrain00006455
WBStrain00007477
WBStrain00007478
WBStrain00007988
WBStrain00007990
WBStrain00007992
WBStrain00007995
WBStrain00008002
WBStrain00008010
WBStrain00008015
WBStrain00008456
WBStrain00022157
WBStrain00047380
RNASeq_FPKM (74)
GO_annotation00069103
00069104
00069105
00108198
Ortholog (29)
ParalogWBGene00000650Caenorhabditis elegansFrom_analysisInparanoid_8
WormBase-Compara
WBGene00000251Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000252Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000256Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000527Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000593Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000594Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000596Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000597Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000598Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000601Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000602Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000603Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000608Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000609Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000610Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000611Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000613Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000614Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000615Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000616Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000618Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000620Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000621Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000622Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000623Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000625Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000626Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000628Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000629Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000630Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000631Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000632Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000633Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000634Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000636Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000638Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000639Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000640Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000641Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000644Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000645Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000647Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000648Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000649Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000651Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000652Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000653Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000654Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000655Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000656Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000657Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000658Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000659Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000662Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000663Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000665Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000666Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000667Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000668Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000669Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000670Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000671Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000672Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000673Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000674Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000675Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000676Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000677Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000678Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000679Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000680Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000681Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000682Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000683Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000684Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000685Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000687Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000688Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000689Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000690Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000691Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000692Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000693Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000694Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000695Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000696Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000697Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000698Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000699Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000702Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000703Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000704Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000705Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000706Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000707Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000708Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000710Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000711Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000712Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000713Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000714Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000715Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000716Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000719Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000720Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000722Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000723Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000724Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000725Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000726Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000727Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000728Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000729Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000730Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000731Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000732Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000733Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000734Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000735Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000736Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000737Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000738Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000739Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000740Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000741Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000742Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000743Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000744Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000745Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000746Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000747Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000748Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000750Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000751Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000752Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000753Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000754Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000756Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000758Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000759Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00001064Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00001065Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00001066Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00001069Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00001070Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00001071Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00001072Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00001074Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00001075Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00001263Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00002280Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00003057Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00003169Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00004300Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00004394Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00004397Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00004398Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00005017Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00005018Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00013489Caenorhabditis elegansFrom_analysisWormBase-Compara
Structured_descriptionConcise_descriptiondpy-17 encodes a cuticle collagen; during development, dpy-17 activity is required for normal body morphology, hermaphrodite tail development, and outgrowth of posterior canal cell processes; genetic and immunofluorescence studies suggest that extracellular assembly of DPY-17 and the essential SQT-3 cuticle collagen is interdependent, as loss of dpy-17 activity results in intracellular retention of SQT-3 and dpy-17(gf) mutations suppress mutations in dpy-31, which encodes a zinc-metalloprotease predicted to affect C-terminal proteolytic maturation of SQT-3.Paper_evidenceWBPaper00000031
WBPaper00005485
WBPaper00027067
Curator_confirmedWBPerson48
WBPerson1843
Date_last_updated08 Aug 2006 00:00:00
Automated_descriptionPredicted to be a structural constituent of cuticle. Involved in cuticle development involved in collagen and cuticulin-based cuticle molting cycle. Predicted to be part of collagen trimer. Used to study Marfan syndrome.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Disease_infoExperimental_modelDOID:14323Homo sapiensPaper_evidenceWBPaper00046710
Curator_confirmedWBPerson324
Date_last_updated25 Sep 2015 00:00:00
Models_disease_in_annotationWBDOannot00000379
Molecular_infoCorresponding_CDSF54D8.1
Corresponding_transcriptF54D8.1.1
Other_sequence (37)
Associated_featureWBsf645149
WBsf645150
WBsf658889
WBsf658890
WBsf658891
WBsf658892
WBsf658893
WBsf658894
WBsf224863
Experimental_infoRNAi_resultWBRNAi00073110Inferred_automaticallyRNAi_primary
WBRNAi00002433Inferred_automaticallyRNAi_primary
WBRNAi00073111Inferred_automaticallyRNAi_primary
WBRNAi00025629Inferred_automaticallyRNAi_primary
WBRNAi00048322Inferred_automaticallyRNAi_primary
WBRNAi00048323Inferred_automaticallyRNAi_primary
WBRNAi00002758Inferred_automaticallyRNAi_primary
WBRNAi00032800Inferred_automaticallyRNAi_primary
Expr_patternExpr13628
Expr1018849
Expr1030684
Expr1152124
Expr2011059
Expr2029296
Drives_constructWBCnstr00000440
WBCnstr00037096
WBCnstr00039888
Construct_productWBCnstr00000440
WBCnstr00037096
Microarray_results (19)
Expression_cluster (311)
Interaction (64)
WBProcessWBbiopr:00000124
Map_infoMapIIIPosition-2.13512Error0.005986
Well_ordered
PositiveInside_rearrnDp2
mT1
ctDp11
Positive_cloneF54D8Inferred_automaticallyFrom sequence, transcript, pseudogene data
Mapping_data2_point (41)
Multi_point (244)
Pos_neg_data1578
1582
1586
1596
1616
3244
4711
5141
8706
Reference (119)
Remark[Smardon A] dpy-17(e164) rescued by sEx271 [F54D8 + pCes1943{rol-6(su1006dm)}]. F54D8.1 encodes predicted protein with C-term similarity to sqt-1 collagen, therefore candidate for dpy-17.
MethodGene