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WormBase Tree Display for Gene: WBGene00000608

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Name Class

WBGene00000608SMapS_parentSequenceZK1193
IdentityVersion1
NameCGC_namecol-19Person_evidenceWBPerson345
Sequence_nameZK1193.1
Molecular_nameZK1193.1
ZK1193.1.1
CE05126
Other_namecol19Accession_evidenceEMBLM25481
CELE_ZK1193.1Accession_evidenceNDBBX284606
Public_namecol-19
DB_infoDatabaseWormQTLgeneWBGene00000608
WormFluxgeneWBGene00000608
NDBlocus_tagCELE_ZK1193.1
PanthergeneCAEEL|WormBase=WBGene00000608|UniProtKB=P18835
familyPTHR24637
NCBIgene180397
RefSeqproteinNM_001038488.6
SwissProtUniProtAccP18835
TREEFAMTREEFAM_IDTF319043
UniProt_GCRPUniProtAccP18835
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:21WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classcol
Allele (25)
Legacy_information[C.elegansII] NMK. Transcript present in dauer, adult;not detected in egg or L4. Encodes collagen,col-8 family. [Cox and Hirsh 1985; Liu et al. 1995; VT]
StrainWBStrain00007918
WBStrain00007932
WBStrain00007933
WBStrain00033323
WBStrain00034928
RNASeq_FPKM (74)
GO_annotation (18)
Ortholog (50)
ParalogWBGene00000597Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00000665Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00000655Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00000748Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00000713Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00000627Caenorhabditis elegansFrom_analysisTreeFam
WBGene00000614Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00000661Caenorhabditis elegansFrom_analysisTreeFam
WBGene00000626Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00000615Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00000618Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00000757Caenorhabditis elegansFrom_analysisTreeFam
WBGene00000612Caenorhabditis elegansFrom_analysisTreeFam
WBGene00000251Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000252Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000256Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000527Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000593Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000594Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000596Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000598Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000601Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000602Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000603Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000609Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000610Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000611Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000613Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000616Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000620Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000621Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000622Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000623Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000625Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000628Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000629Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000630Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000631Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000632Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000633Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000634Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000636Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000638Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000639Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000640Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000641Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000644Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000645Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000647Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000648Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000649Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000650Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000651Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000652Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000653Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000654Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000656Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000657Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000658Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000659Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000662Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000663Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000666Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000667Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000668Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000669Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000670Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000671Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000672Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000673Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000674Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000675Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000676Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000677Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000678Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000679Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000680Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000681Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000682Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000683Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000684Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000685Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000687Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000688Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000689Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000690Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000691Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000692Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000693Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000694Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000695Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000696Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000697Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000698Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000699Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000702Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000703Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000704Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000705Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000706Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000707Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000708Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000710Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000711Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000712Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000714Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000715Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000716Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000719Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000720Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000722Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000723Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000724Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000725Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000726Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000727Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000728Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000729Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000730Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000731Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000732Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000733Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000734Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000735Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000736Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000737Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000738Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000739Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000740Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000741Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000742Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000743Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000744Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000745Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000746Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000747Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000750Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000751Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000752Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000753Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000754Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000756Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000758Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000759Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00001064Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00001065Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00001066Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00001069Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00001070Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00001071Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00001072Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00001074Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00001075Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00001076Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00001263Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00002280Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00003057Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00003169Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00004300Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00004394Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00004397Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00004398Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00005017Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00005018Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00013489Caenorhabditis elegansFrom_analysisWormBase-Compara
Structured_descriptionConcise_descriptioncol-19 encodes a member of the collagen superfamily containing collagen triple helix repeats (20 copies) that is required for normal structure of the alae; expressed during the L2-to-dauer and L4-to-adult molts with strongest expression in adult animals.Paper_evidenceWBPaper00000748
WBPaper00002222
WBPaper00005747
Curator_confirmedWBPerson48
Date_last_updated01 Sep 2004 00:00:00
Automated_descriptionA structural constituent of collagen and cuticulin-based cuticle. Involved in cuticle development involved in collagen and cuticulin-based cuticle molting cycle. Located in alae of collagen and cuticulin-based cuticle extracellular matrix and annuli extracellular matrix. Expressed in cuticle; hyp7 syncytium; syncytium; vulva; and in male.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSZK1193.1
Corresponding_CDS_historyZK1193.1a:wp145
ZK1193.1b:wp145
Corresponding_transcriptZK1193.1.1
Other_sequence (62)
Associated_featureWBsf235261
WBsf235262
Experimental_infoRNAi_result (14)
Expr_pattern (13)
Drives_constructWBCnstr00000525
WBCnstr00000749
WBCnstr00000750
WBCnstr00000930
WBCnstr00004851
WBCnstr00004917
WBCnstr00006447
WBCnstr00008821
WBCnstr00008980
WBCnstr00008981
WBCnstr00008982
WBCnstr00008983
WBCnstr00008984
WBCnstr00008985
WBCnstr00008986
WBCnstr00009539
WBCnstr00009540
WBCnstr00009541
WBCnstr00009604
WBCnstr00010258
WBCnstr00011689
WBCnstr00012421
WBCnstr00015874
WBCnstr00019565
WBCnstr00019751
WBCnstr00020557
WBCnstr00020586
WBCnstr00022574
WBCnstr00022735
WBCnstr00022939
WBCnstr00022993
WBCnstr00037431
WBCnstr00038159
WBCnstr00038748
WBCnstr00040230
WBCnstr00040701
WBCnstr00041860
WBCnstr00041861
WBCnstr00041874
WBCnstr00042875
Construct_productWBCnstr00000750
WBCnstr00004851
WBCnstr00010258
WBCnstr00011689
WBCnstr00012421
WBCnstr00037431
Microarray_results (21)
Expression_cluster (272)
Interaction (298)
Map_infoMapXPosition-19.9103
PositivePositive_cloneZK1193Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
Reference (68)
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene