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WormBase Tree Display for Gene: WBGene00000620

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Name Class

WBGene00000620SMapS_parentSequenceZC513
IdentityVersion1
NameCGC_namecol-43Person_evidenceWBPerson345
Sequence_nameZC513.8
Molecular_nameZC513.8
ZC513.8.1
CE07615
Other_nameCELE_ZC513.8Accession_evidenceNDBBX284605
Public_namecol-43
DB_infoDatabaseAceViewgene5I530
WormQTLgeneWBGene00000620
WormFluxgeneWBGene00000620
NDBlocus_tagCELE_ZC513.8
PanthergeneCAEEL|WormBase=WBGene00000620|UniProtKB=G5ED38
familyPTHR24637
NCBIgene179187
RefSeqproteinNM_072673.7
TrEMBLUniProtAccG5ED38
UniProt_GCRPUniProtAccG5ED38
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:21WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classcol
Allele (25)
StrainWBStrain00055320
RNASeq_FPKM (74)
GO_annotation00013181
00013182
00013183
00107628
Ortholog (30)
ParalogWBGene00000252Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00000256Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00000593Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00000594Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00000598Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00000602Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00000603Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00000609Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00000610Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00000611Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00000613Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00000617Caenorhabditis elegansFrom_analysisTreeFam
WBGene00005018Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00005017Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00001065Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00001074Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00001066Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00004398Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00001075Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00004394Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00000657Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00004300Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00000744Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00000699Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00000693Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00000759Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00000653Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00000696Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00000691Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00000745Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00000747Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00000739Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00000753Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00000727Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00000728Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00000730Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00000738Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00000660Caenorhabditis elegansFrom_analysisTreeFam
WBGene00000675Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00000732Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00000670Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00000707Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00000682Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00000751Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00000679Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00000644Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00000741Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00000742Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00000743Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00000711Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00000710Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00000754Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00000647Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00000667Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00000668Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00000669Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00000671Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00000673Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00000688Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00000712Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00000758Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00000621Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00000756Caenorhabditis elegansFrom_analysisTreeFam
WormBase-Compara
WBGene00000251Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000527Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000596Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000597Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000601Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000608Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000614Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000615Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000616Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000618Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000622Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000623Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000625Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000626Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000628Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000629Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000630Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000631Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000632Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000633Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000634Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000636Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000638Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000639Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000640Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000641Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000645Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000648Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000649Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000650Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000651Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000652Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000654Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000655Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000656Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000658Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000659Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000662Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000663Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000665Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000666Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000672Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000674Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000676Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000677Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000678Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000680Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000681Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000683Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000684Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000685Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000687Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000689Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000690Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000692Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000694Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000695Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000697Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000698Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000702Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000703Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000704Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000705Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000706Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000708Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000713Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000714Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000715Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000716Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000719Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000720Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000722Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000723Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000724Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000725Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000726Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000729Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000731Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000733Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000734Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000735Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000736Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000737Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000740Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000746Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000748Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000750Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000752Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00001064Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00001069Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00001070Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00001071Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00001072Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00001076Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00001263Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00002280Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00003057Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00003169Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00004397Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00013489Caenorhabditis elegansFrom_analysisWormBase-Compara
Structured_descriptionConcise_descriptioncol-43 encodes a collagen that is individually dispensable for viability and gross morphology in mass RNAi screens.Paper_evidenceWBPaper00001918
WBPaper00005654
Curator_confirmedWBPerson567
Date_last_updated17 Jun 2004 00:00:00
Automated_descriptionPredicted to be a structural constituent of cuticle. Predicted to be located in membrane. Predicted to be part of collagen trimer. Expressed in hypodermis. Is an ortholog of human C1QTNF9 (C1q and TNF related 9); C1QTNF9B (C1q and TNF related 9B); and OTOL1 (otolin 1).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSZC513.8
Corresponding_transcriptZC513.8.1
Other_sequence (101)
Associated_featureWBsf1000573
WBsf1019978
WBsf234021
Experimental_infoRNAi_resultWBRNAi00021744Inferred_automaticallyRNAi_primary
WBRNAi00038094Inferred_automaticallyRNAi_primary
WBRNAi00058996Inferred_automaticallyRNAi_primary
Expr_patternExpr3261
Expr1026110
Expr1030364
Expr1162429
Expr2010396
Expr2028638
Drives_constructWBCnstr00011264
WBCnstr00037421
Construct_productWBCnstr00037421
Microarray_results (17)
Expression_cluster (250)
Interaction (64)
Map_infoMapVPosition1.00518Error0.000157
PositivePositive_cloneZC513Inferred_automaticallyFrom CDS info
From sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00011971
WBPaper00025069
WBPaper00025183
WBPaper00027067
WBPaper00037548
WBPaper00038491
WBPaper00055090
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene