WormBase Tree Display for Expression_cluster: WBPaper00053657:N2_M.humicola-infection_12hr
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WBPaper00053657:N2_M.humicola-infection_12hr | Description | Transcripts that showed significantly changed expression 12 hours after N2 larva animals were infected by oomycete Myzocytiopsis humicola. | |
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Species | Caenorhabditis elegans | ||
Algorithm | The counts were then normalized using DESeq2 package in R 3.3.2 . The differences in gene expression were calculated using the negative binomial test with Benjamini-Hochberg multiple test correction using DESeq2. FDR < 10% irrespective of their log2FoldChange are reported. | ||
Reference | WBPaper00053657 | ||
Based_on_WB_Release | 262 | ||
Gene | WBGene00021625 | log2 Fold Change infected vs control: 1.249968119, p-value: 5.54848708810594E-20, FDR: 7.63590719475265E-17 | |
WBGene00011161 | log2 Fold Change infected vs control: 0.327910583, p-value: 0.000069819, FDR: 0.0189465038 | ||
WBGene00015225 | log2 Fold Change infected vs control: 1.317091672, p-value: 3.88955445000989E-24, FDR: 6.81273141712188E-21 | ||
WBGene00018343 | log2 Fold Change infected vs control: -0.815983656, p-value: 3.59956591321802E-11, FDR: 2.31176121499905E-08 | ||
WBGene00016274 | log2 Fold Change infected vs control: 0.514143419, p-value: 7.85669112350787E-06, FDR: 0.0029110552 | ||
WBGene00001067 | log2 Fold Change infected vs control: 1.703303471, p-value: 3.51355288283397E-36, FDR: 2.2565207797854E-32 | ||
WBGene00001074 | log2 Fold Change infected vs control: 1.485049323, p-value: 3.78398613104995E-28, FDR: 1.21510101311566E-24 | ||
WBGene00019314 | log2 Fold Change infected vs control: 0.398945243, p-value: 0.0002317815, FDR: 0.0531635072 | ||
WBGene00000681 | log2 Fold Change infected vs control: 1.065317859, p-value: 2.21670405303723E-15, FDR: 2.51230805822755E-12 | ||
WBGene00000625 | log2 Fold Change infected vs control: 0.677765582, p-value: 4.54618694306329E-07, FDR: 0.0001904161 | ||
WBGene00022382 | log2 Fold Change infected vs control: 0.508277894, p-value: 4.98646543717469E-05, FDR: 0.0143394373 | ||
WBGene00012185 | log2 Fold Change infected vs control: 0.384534585, p-value: 0.0002828149, FDR: 0.0633603979 | ||
WBGene00000730 | log2 Fold Change infected vs control: 0.457880247, p-value: 1.76379249000434E-05, FDR: 0.0058591362 | ||
WBGene00017307 | log2 Fold Change infected vs control: 0.353744286, p-value: 0.0003962755, FDR: 0.0787117603 | ||
WBGene00001716 | log2 Fold Change infected vs control: 0.581031894, p-value: 1.07935731749172E-06, FDR: 0.0004423549 | ||
WBGene00018297 | log2 Fold Change infected vs control: 0.800888532, p-value: 3.70204204099172E-09, FDR: 0.000002229 | ||
WBGene00005018 | log2 Fold Change infected vs control: 0.494370239, p-value: 0.0003380349, FDR: 0.0713493572 | ||
WBGene00019520 | log2 Fold Change infected vs control: 0.410873351, p-value: 0.0004680245, FDR: 0.0901742775 | ||
WBGene00000606 | log2 Fold Change infected vs control: 1.16093254, p-value: 4.99614423357864E-20, FDR: 7.40467007295074E-17 | ||
WBGene00020242 | log2 Fold Change infected vs control: 0.564730442, p-value: 0.000003449, FDR: 0.001356154 | ||
WBGene00000603 | log2 Fold Change infected vs control: 0.709268903, p-value: 4.73551771241682E-08, FDR: 2.4010320990825E-05 | ||
WBGene00010963 | log2 Fold Change infected vs control: -0.615870589, p-value: 6.39945204404287E-06, FDR: 0.0024176126 | ||
WBGene00000718 | log2 Fold Change infected vs control: 0.408472287, p-value: 6.12676550150565E-05, FDR: 0.0171078827 | ||
WBGene00001158 | log2 Fold Change infected vs control: -0.731429485, p-value: 1.14212488994236E-07, FDR: 5.23936196536178E-05 | ||
WBGene00008477 | log2 Fold Change infected vs control: 0.289756238, p-value: 0.00036585, FDR: 0.0741982304 | ||
WBGene00000649 | log2 Fold Change infected vs control: 1.537702657, p-value: 3.55952320044804E-30, FDR: 1.37162667006065E-26 | ||
WBGene00015339 | log2 Fold Change infected vs control: 0.550530321, p-value: 2.31535174786999E-05, FDR: 0.0074349804 | ||
WBGene00015340 | log2 Fold Change infected vs control: 0.428272681, p-value: 0.0002105072, FDR: 0.0494614935 | ||
WBGene00000734 | log2 Fold Change infected vs control: 0.372750175, p-value: 3.31015961340529E-05, FDR: 0.0101233088 | ||
WBGene00012942 | log2 Fold Change infected vs control: 0.501746532, p-value: 0.00002812, FDR: 0.0088817658 | ||
WBGene00012529 | log2 Fold Change infected vs control: -0.722777892, p-value: 4.72430687321698E-12, FDR: 3.64092882105086E-09 | ||
WBGene00019184 | log2 Fold Change infected vs control: 0.477422368, p-value: 1.12596303183054E-05, FDR: 0.003873916 | ||
WBGene00001725 | log2 Fold Change infected vs control: 0.690887513, p-value: 5.55903307645465E-08, FDR: 0.000027463 | ||
WBGene00001695 | log2 Fold Change infected vs control: 0.338943877, p-value: 0.000091753, FDR: 0.023889259 | ||
WBGene00000691 | log2 Fold Change infected vs control: 1.337360541, p-value: 1.60368934010555E-24, FDR: 3.08982825158136E-21 | ||
WBGene00000683 | log2 Fold Change infected vs control: 0.45183819, p-value: 0.0002302232, FDR: 0.0531635072 | ||
WBGene00008301 | log2 Fold Change infected vs control: 0.304116961, p-value: 0.0003781496, FDR: 0.0758938336 | ||
WBGene00000599 | log2 Fold Change infected vs control: 1.159902663, p-value: 6.21009639759511E-18, FDR: 7.97666181949767E-15 | ||
WBGene00015169 | log2 Fold Change infected vs control: 0.483559292, p-value: 0.0003657467, FDR: 0.0741982304 | ||
WBGene00017073 | log2 Fold Change infected vs control: 0.345626265, p-value: 0.0004611757, FDR: 0.089752241 | ||
WBGene00019154 | log2 Fold Change infected vs control: 0.470643658, p-value: 0.0003406935, FDR: 0.0713493572 | ||
WBGene00009261 | log2 Fold Change infected vs control: 0.355828366, p-value: 0.0001048249, FDR: 0.0269288228 | ||
WBGene00009983 | log2 Fold Change infected vs control: 1.016528109, p-value: 1.34546441974057E-13, FDR: 1.23443157024484E-10 | ||
WBGene00000738 | log2 Fold Change infected vs control: 0.784328487, p-value: 0.000000007, FDR: 3.86174066968229E-06 | ||
WBGene00077691 | log2 Fold Change infected vs control: 0.307881338, p-value: 0.0003153163, FDR: 0.0675022195 | ||
WBGene00010468 | log2 Fold Change infected vs control: 0.458869333, p-value: 6.05828894613997E-05, FDR: 0.0171078827 | ||
WBGene00000704 | log2 Fold Change infected vs control: 0.866194263, p-value: 2.60827562733882E-11, FDR: 1.73288436248059E-08 | ||
WBGene00000829 | log2 Fold Change infected vs control: -0.573004474, p-value: 1.73953640532133E-05, FDR: 0.0058591362 | ||
WBGene00016281 | log2 Fold Change infected vs control: 0.40564472, p-value: 6.93414470562748E-05, FDR: 0.0189465038 | ||
WBGene00000641 | log2 Fold Change infected vs control: 0.715344137, p-value: 9.48306267504255E-08, FDR: 4.45634557463524E-05 | ||
WBGene00010967 | log2 Fold Change infected vs control: -0.475628583, p-value: 8.69935117278412E-06, FDR: 0.0031624604 | ||
WBGene00008167 | log2 Fold Change infected vs control: -0.384952808, p-value: 0.0004581605, FDR: 0.089752241 | ||
WBGene00000743 | log2 Fold Change infected vs control: 0.930459658, p-value: 1.41373380587222E-11, FDR: 9.7280032991929E-09 | ||
WBGene00000616 | log2 Fold Change infected vs control: 0.744210757, p-value: 1.33360114194269E-08, FDR: 6.94445762211077E-06 | ||
WBGene00044901 | log2 Fold Change infected vs control: 0.513641052, p-value: 0.0001960527, FDR: 0.0471540857 | ||
WBGene00015227 | log2 Fold Change infected vs control: 1.459294918, p-value: 2.98183329230046E-26, FDR: 7.18137275534412E-23 | ||
WBGene00015660 | log2 Fold Change infected vs control: 0.538199769, p-value: 7.45596170143055E-05, FDR: 0.0199519464 | ||
WBGene00007999 | log2 Fold Change infected vs control: 0.508944158, p-value: 0.0001066249, FDR: 0.0270308155 | ||
WBGene00000618 | log2 Fold Change infected vs control: 0.774372701, p-value: 5.62428686412649E-11, FDR: 0.000000035 | ||
WBGene00022679 | log2 Fold Change infected vs control: 1.081291633, p-value: 4.10477765550867E-15, FDR: 4.39370839381586E-12 | ||
WBGene00016659 | log2 Fold Change infected vs control: 0.567347467, p-value: 0.000001102, FDR: 0.0004423549 | ||
WBGene00000742 | log2 Fold Change infected vs control: 1.028288631, p-value: 8.75470442799138E-14, FDR: 8.4338445107055E-11 | ||
WBGene00000631 | log2 Fold Change infected vs control: 0.327499075, p-value: 0.0001982395, FDR: 0.0471540857 | ||
WBGene00001066 | log2 Fold Change infected vs control: 0.873069473, p-value: 7.53686012708977E-12, FDR: 5.58510323340918E-09 | ||
WBGene00009724 | log2 Fold Change infected vs control: 0.611930485, p-value: 9.10086444386484E-06, FDR: 0.0032471547 | ||
WBGene00000678 | log2 Fold Change infected vs control: 0.766781497, p-value: 5.13203694521905E-09, FDR: 2.99633199465259E-06 | ||
WBGene00017484 | log2 Fold Change infected vs control: 0.581802325, p-value: 2.11948689380836E-05, FDR: 0.006921382 | ||
WBGene00000602 | log2 Fold Change infected vs control: 0.466550665, p-value: 0.000305027, FDR: 0.066033202 | ||
WBGene00000741 | log2 Fold Change infected vs control: 1.406383335, p-value: 3.76979086046086E-25, FDR: 8.07028450094437E-22 | ||
WBGene00000740 | log2 Fold Change infected vs control: 1.81531927, p-value: 9.65202542348518E-48, FDR: 1.85965573834289E-43 | ||
WBGene00000594 | log2 Fold Change infected vs control: 1.497107934, p-value: 4.3032707302987E-32, FDR: 2.07277792901663E-28 | ||
WBGene00022189 | log2 Fold Change infected vs control: 0.858659188, p-value: 1.59904187074734E-13, FDR: 1.40039726016768E-10 | ||
WBGene00044621 | |||
WBGene00000699 | log2 Fold Change infected vs control: 1.770967266, p-value: 6.1541493787124E-41, FDR: 5.92859980398259E-37 | ||
WBGene00000665 | log2 Fold Change infected vs control: 1.438793112, p-value: 2.39311712418881E-27, FDR: 6.58688394739225E-24 | ||
WBGene00000717 | log2 Fold Change infected vs control: 1.201613567, p-value: 1.59337152907714E-21, FDR: 2.5582907708941E-18 | ||
WBGene00000031 | log2 Fold Change infected vs control: 1.092943927, p-value: 7.28938300375219E-17, FDR: 8.77778389583084E-14 | ||
WBGene00004174 | log2 Fold Change infected vs control: 0.952632654, p-value: 4.4715475036543E-12, FDR: 3.58972107303781E-09 | ||
WBGene00000672 | log2 Fold Change infected vs control: 0.929072466, p-value: 1.19983860937903E-11, FDR: 8.5619594395947E-09 | ||
WBGene00004300 | log2 Fold Change infected vs control: 0.911662266, p-value: 1.05692029159114E-12, FDR: 8.85377532960278E-10 | ||
WBGene00000650 | log2 Fold Change infected vs control: 0.70338582, p-value: 3.20440973557427E-07, FDR: 0.0001371986 | ||
WBGene00000739 | log2 Fold Change infected vs control: 0.702841713, p-value: 7.73693323192276E-09, FDR: 4.14076368276266E-06 | ||
WBGene00000653 | log2 Fold Change infected vs control: 0.558574057, p-value: 4.31241947441024E-06, FDR: 0.0016617477 | ||
WBGene00010573 | log2 Fold Change infected vs control: 0.510250458, p-value: 4.36765455745388E-05, FDR: 0.0131486876 | ||
WBGene00009041 | log2 Fold Change infected vs control: 0.498296082, p-value: 0.0002978486, FDR: 0.0659614935 | ||
WBGene00001076 | log2 Fold Change infected vs control: 0.498192931, p-value: 0.0003028309, FDR: 0.066033202 | ||
WBGene00016805 | log2 Fold Change infected vs control: 0.474283616, p-value: 9.11365654189219E-05, FDR: 0.023889259 | ||
WBGene00019839 | log2 Fold Change infected vs control: 0.470170393, p-value: 0.0001530944, FDR: 0.0383073877 | ||
WBGene00011508 | log2 Fold Change infected vs control: 0.460260856, p-value: 0.0005235942, FDR: 0.0989028291 | ||
WBGene00017998 | log2 Fold Change infected vs control: 0.456243815, p-value: 4.91477211018137E-05, FDR: 0.0143394373 | ||
WBGene00017937 | log2 Fold Change infected vs control: 0.450219783, p-value: 0.0003657925, FDR: 0.0741982304 | ||
WBGene00020803 | log2 Fold Change infected vs control: 0.356183245, p-value: 0.0001849459, FDR: 0.0451057196 | ||
WBGene00018138 | log2 Fold Change infected vs control: -0.356551688, p-value: 0.0005210538, FDR: 0.0989028291 | ||
WBGene00000022 | log2 Fold Change infected vs control: -0.457534922, p-value: 0.0002712899, FDR: 0.0614934489 | ||
Attribute_of | RNASeq | ||
Regulation | Regulated_by_treatment | Oomycete: Myzocytiopsis humicola | |
Associated_with | Life_stage | WBls:0000038 |