WormBase Tree Display for Gene: WBGene00016805
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WBGene00016805 | SMap | S_parent | Sequence | C50D2 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | C50D2.1 | |||||||
Molecular_name | C50D2.1a | ||||||||
C50D2.1a.1 | |||||||||
CE27874 | |||||||||
C50D2.1b | |||||||||
CE08886 | |||||||||
C50D2.1b.1 | |||||||||
Other_name | CELE_C50D2.1 | Accession_evidence | NDB | BX284602 | |||||
Public_name | C50D2.1 | ||||||||
DB_info | Database | AceView | gene | 2A403 | |||||
WormQTL | gene | WBGene00016805 | |||||||
WormFlux | gene | WBGene00016805 | |||||||
NDB | locus_tag | CELE_C50D2.1 | |||||||
Panther | gene | CAEEL|EnsemblGenome=WBGene00016805|UniProtKB=O44799 | |||||||
family | PTHR36937 | ||||||||
NCBI | gene | 173396 | |||||||
RefSeq | protein | NM_061262.6 | |||||||
NM_001313594.3 | |||||||||
TrEMBL | UniProtAcc | O44799 | |||||||
A0A0K3ARI6 | |||||||||
UniProt_GCRP | UniProtAcc | O44799 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (31) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog (29) | |||||||||
Paralog | WBGene00011927 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00017126 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
Structured_description | Automated_description | Enriched in germline precursor cell; hypodermis; and tail hypodermis based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray and RNA-seq studies. Is affected by twenty-two chemicals including Ethanol; methylmercury hydroxide; and 1-methylnicotinamide based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | C50D2.1a | |||||||
C50D2.1b | |||||||||
Corresponding_transcript | C50D2.1a.1 | ||||||||
C50D2.1b.1 | |||||||||
Other_sequence | FC811571.1 | ||||||||
FC810255.1 | |||||||||
Dviv_isotig30854 | |||||||||
CR08493 | |||||||||
CRC01907_1 | |||||||||
Dviv_isotig27490 | |||||||||
CJC11465_1 | |||||||||
FC817126.1 | |||||||||
SRC01683_1 | |||||||||
SRC07699_1 | |||||||||
Associated_feature | WBsf643892 | ||||||||
WBsf657235 | |||||||||
WBsf657236 | |||||||||
WBsf986327 | |||||||||
WBsf986328 | |||||||||
WBsf220725 | |||||||||
Experimental_info | RNAi_result | WBRNAi00024877 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00012202 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00042883 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00030021 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00064454 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00106819 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00027235 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00024876 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00023099 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1027774 | ||||||||
Expr1037213 | |||||||||
Expr1146858 | |||||||||
Expr2001809 | |||||||||
Expr2020035 | |||||||||
Drives_construct | WBCnstr00027792 | ||||||||
Construct_product | WBCnstr00027792 | ||||||||
Microarray_results (19) | |||||||||
Expression_cluster (221) | |||||||||
Interaction (198) | |||||||||
Map_info | Positive | Positive_clone | C50D2 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | II | -16.1155 | |||||||
Method | Gene |