WormBase Tree Display for Gene: WBGene00016805
expand all nodes | collapse all nodes | view schema
| WBGene00016805 | SMap | S_parent | Sequence | C50D2 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | C50D2.1 | |||||||
| Molecular_name | C50D2.1a | ||||||||
| C50D2.1a.1 | |||||||||
| CE27874 | |||||||||
| C50D2.1b | |||||||||
| CE08886 | |||||||||
| C50D2.1b.1 | |||||||||
| Other_name | CELE_C50D2.1 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | C50D2.1 | ||||||||
| DB_info | Database | AceView | gene | 2A403 | |||||
| WormQTL | gene | WBGene00016805 | |||||||
| WormFlux | gene | WBGene00016805 | |||||||
| NDB | locus_tag | CELE_C50D2.1 | |||||||
| Panther | gene | CAEEL|EnsemblGenome=WBGene00016805|UniProtKB=O44799 | |||||||
| family | PTHR36937 | ||||||||
| NCBI | gene | 173396 | |||||||
| RefSeq | protein | NM_061262.6 | |||||||
| NM_001313594.3 | |||||||||
| TrEMBL | UniProtAcc | O44799 | |||||||
| A0A0K3ARI6 | |||||||||
| UniProt_GCRP | UniProtAcc | O44799 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:57 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele | WBVar01412394 | ||||||||
| WBVar01500106 | |||||||||
| WBVar01498661 | |||||||||
| WBVar00008986 | |||||||||
| WBVar00008991 | |||||||||
| WBVar02129182 | |||||||||
| WBVar02129183 | |||||||||
| WBVar01694938 | |||||||||
| WBVar01622993 | |||||||||
| WBVar01291035 | |||||||||
| WBVar01291036 | |||||||||
| WBVar01622994 | |||||||||
| WBVar01715440 | |||||||||
| WBVar01715441 | |||||||||
| WBVar01236918 | |||||||||
| WBVar00696653 | |||||||||
| WBVar00696654 | |||||||||
| WBVar00696655 | |||||||||
| WBVar00696656 | |||||||||
| WBVar00696657 | |||||||||
| WBVar00696658 | |||||||||
| WBVar00696659 | |||||||||
| WBVar00696660 | |||||||||
| WBVar00696661 | |||||||||
| WBVar00696662 | |||||||||
| WBVar00354127 | |||||||||
| WBVar00354128 | |||||||||
| WBVar00354129 | |||||||||
| WBVar00354130 | |||||||||
| WBVar00354131 | |||||||||
| WBVar01681531 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (29) | |||||||||
| Paralog | WBGene00011927 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00017126 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Enriched in germline precursor cell; hypodermis; and tail hypodermis based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray and RNA-seq studies. Is affected by twenty-two chemicals including Ethanol; methylmercury hydroxide; and 1-methylnicotinamide based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C50D2.1a | |||||||
| C50D2.1b | |||||||||
| Corresponding_transcript | C50D2.1a.1 | ||||||||
| C50D2.1b.1 | |||||||||
| Other_sequence | FC811571.1 | ||||||||
| FC810255.1 | |||||||||
| Dviv_isotig30854 | |||||||||
| CR08493 | |||||||||
| CRC01907_1 | |||||||||
| Dviv_isotig27490 | |||||||||
| CJC11465_1 | |||||||||
| FC817126.1 | |||||||||
| SRC01683_1 | |||||||||
| SRC07699_1 | |||||||||
| Associated_feature | WBsf643892 | ||||||||
| WBsf657235 | |||||||||
| WBsf657236 | |||||||||
| WBsf986327 | |||||||||
| WBsf986328 | |||||||||
| WBsf220725 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00024877 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00012202 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00042883 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00030021 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00064454 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00106819 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00027235 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00024876 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00023099 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1027774 | ||||||||
| Expr1037213 | |||||||||
| Expr1146858 | |||||||||
| Expr2001809 | |||||||||
| Expr2020035 | |||||||||
| Drives_construct | WBCnstr00027792 | ||||||||
| Construct_product | WBCnstr00027792 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (221) | |||||||||
| Interaction (198) | |||||||||
| Map_info | Positive | Positive_clone | C50D2 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | II | -16.1155 | |||||||
| Method | Gene |
