WormBase Tree Display for Gene: WBGene00012942
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| WBGene00012942 | SMap | S_parent | Sequence | Y47D3B | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | idpc-1 | Person_evidence | WBPerson1820 | |||||
| Sequence_name | Y47D3B.6 | ||||||||
| Molecular_name | Y47D3B.6 | ||||||||
| Y47D3B.6.1 | |||||||||
| CE24344 | |||||||||
| Other_name | CELE_Y47D3B.6 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | idpc-1 | ||||||||
| DB_info | Database | AceView | gene | 3M517 | |||||
| WormQTL | gene | WBGene00012942 | |||||||
| WormFlux | gene | WBGene00012942 | |||||||
| NDB | locus_tag | CELE_Y47D3B.6 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00012942|UniProtKB=Q9U2B8 | |||||||
| family | PTHR37157 | ||||||||
| NCBI | gene | 176573 | |||||||
| RefSeq | protein | NM_067070.5 | |||||||
| TrEMBL | UniProtAcc | Q9U2B8 | |||||||
| UniProt_GCRP | UniProtAcc | Q9U2B8 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 04 Jan 2022 10:41:14 | WBPerson1983 | Name_change | CGC_name | idpc-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | idpc | ||||||||
| Allele (30) | |||||||||
| Strain | WBStrain00037212 | ||||||||
| WBStrain00055543 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (26) | |||||||||
| Paralog | WBGene00004114 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WBGene00017032 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| Structured_description | Automated_description | Expressed in cuticle and pharynx. Is predicted to encode a protein with the following domains: EB module and EB domain. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y47D3B.6 | |||||||
| Corresponding_transcript | Y47D3B.6.1 | ||||||||
| Other_sequence (12) | |||||||||
| Associated_feature | WBsf645618 | ||||||||
| WBsf645619 | |||||||||
| WBsf717993 | |||||||||
| WBsf994377 | |||||||||
| WBsf1015996 | |||||||||
| WBsf225821 | |||||||||
| WBsf225822 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00037169 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00056773 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00006263 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00020705 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr16368 | ||||||||
| Expr1017311 | |||||||||
| Expr1035738 | |||||||||
| Expr1160229 | |||||||||
| Expr2007613 | |||||||||
| Expr2025850 | |||||||||
| Drives_construct | WBCnstr00029781 | ||||||||
| Construct_product | WBCnstr00029781 | ||||||||
| Microarray_results (25) | |||||||||
| Expression_cluster (244) | |||||||||
| Interaction (75) | |||||||||
| Map_info | Map | III | Position | 9.44654 | |||||
| Positive | Positive_clone | Y47D3B | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00064648 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
