WormBase Tree Display for Gene: WBGene00004114
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| WBGene00004114 | SMap | S_parent | Sequence | D1044 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | pqn-25 | Person_evidence | WBPerson625 | |||||
| Sequence_name | D1044.3 | ||||||||
| Molecular_name | D1044.3 | ||||||||
| D1044.3.1 | |||||||||
| CE29743 | |||||||||
| Other_name | CELE_D1044.3 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | pqn-25 | ||||||||
| DB_info | Database | AceView | gene | 3G600 | |||||
| WormQTL | gene | WBGene00004114 | |||||||
| WormFlux | gene | WBGene00004114 | |||||||
| NDB | locus_tag | CELE_D1044.3 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00004114|UniProtKB=P41951 | |||||||
| family | PTHR37157 | ||||||||
| NCBI | gene | 175759 | |||||||
| RefSeq | protein | NM_171123.6 | |||||||
| SwissProt | UniProtAcc | P41951 | |||||||
| TREEFAM | TREEFAM_ID | TF351707 | |||||||
| UniProt_GCRP | UniProtAcc | P41951 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:34 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | pqn | ||||||||
| Allele (46) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00045578 | ||||||||
| 00045579 | |||||||||
| Ortholog (29) | |||||||||
| Paralog | WBGene00012942 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WBGene00017032 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Inparanoid_8 | |||||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00015218 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Concise_description | The protein product of this gene is predicted to contain a glutamine/asparagine (Q/N)-rich ('prion') domain, by the algorithm of Michelitsch and Weissman (as of the WS77 release of WormBase, i.e., in wormpep77). | Paper_evidence | WBPaper00005068 | |||||
| WBPaper00012788 | |||||||||
| WBPaper00012830 | |||||||||
| WBPaper00012882 | |||||||||
| WBPaper00012897 | |||||||||
| WBPaper00013003 | |||||||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Predicted to be located in membrane. Expressed in intestine and pharyngeal gland cell. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | D1044.3 | |||||||
| Corresponding_CDS_history | D1044.3:wp88 | ||||||||
| Corresponding_transcript | D1044.3.1 | ||||||||
| Other_sequence | Acan_isotig08625 | ||||||||
| Tcol_isotig16573 | |||||||||
| EY470454.1 | |||||||||
| FC539962.1 | |||||||||
| EY470963.1 | |||||||||
| CJC00793_1 | |||||||||
| CBC03309_1 | |||||||||
| ACC08464_1 | |||||||||
| Associated_feature | WBsf992416 | ||||||||
| WBsf992417 | |||||||||
| WBsf1014898 | |||||||||
| WBsf226688 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00000909 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr10182 | ||||||||
| Expr1011921 | |||||||||
| Expr1147355 | |||||||||
| Expr2015041 | |||||||||
| Expr2033276 | |||||||||
| Drives_construct | WBCnstr00035686 | ||||||||
| Construct_product | WBCnstr00035686 | ||||||||
| Microarray_results (17) | |||||||||
| Expression_cluster (150) | |||||||||
| Interaction | WBInteraction000356953 | ||||||||
| Map_info | Map | III | Position | -1.60108 | Error | 0.011084 | |||
| Positive | Positive_clone | D1044 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00027258 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00041771 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
