WormBase Tree Display for Gene: WBGene00000718
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| WBGene00000718 | Evidence | Person_evidence | WBPerson345 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| WBPerson651 | |||||||||
| SMap | S_parent | Sequence | B0222 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | col-145 | Person_evidence | WBPerson345 | |||||
| Sequence_name | B0222.7 | ||||||||
| Molecular_name | B0222.7 | ||||||||
| B0222.7.1 | |||||||||
| CE48016 | |||||||||
| Other_name | CELE_B0222.7 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | col-145 | ||||||||
| DB_info | Database | AceView | gene | 5J642 | |||||
| WormQTL | gene | WBGene00000718 | |||||||
| WormFlux | gene | WBGene00000718 | |||||||
| NDB | locus_tag | CELE_B0222.7 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00000718|UniProtKB=Q17459 | |||||||
| family | PTHR24637 | ||||||||
| NCBI | gene | 179297 | |||||||
| RefSeq | protein | NM_072974.8 | |||||||
| SwissProt | UniProtAcc | Q17459 | |||||||
| TREEFAM | TREEFAM_ID | TF316783 | |||||||
| UniProt_GCRP | UniProtAcc | Q17459 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:21 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | col | ||||||||
| Allele (25) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00058226 | ||||||||
| 00058227 | |||||||||
| 00058228 | |||||||||
| 00058229 | |||||||||
| 00058230 | |||||||||
| 00058231 | |||||||||
| 00107706 | |||||||||
| Ortholog (44) | |||||||||
| Paralog (39) | |||||||||
| Structured_description | Automated_description | Predicted to be a structural constituent of cuticle. Predicted to be part of collagen trimer. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | B0222.7 | |||||||
| Corresponding_transcript | B0222.7.1 | ||||||||
| Other_sequence (38) | |||||||||
| Associated_feature | WBsf652889 | ||||||||
| WBsf1000824 | |||||||||
| WBsf1020135 | |||||||||
| WBsf234190 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00028009 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00009603 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00009602 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00038758 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1015365 | ||||||||
| Expr1030435 | |||||||||
| Expr1142969 | |||||||||
| Expr2010339 | |||||||||
| Expr2028582 | |||||||||
| Drives_construct | WBCnstr00037340 | ||||||||
| Construct_product | WBCnstr00037340 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (307) | |||||||||
| Interaction (87) | |||||||||
| Map_info | Map | V | Position | 1.94734 | Error | 0.000151 | |||
| Positive | Positive_clone | B0222 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00025192 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
