WormBase Tree Display for Gene: WBGene00008477

WBGene00008477 SMap: S_parent: Sequence: E03H4
  Identity: Version: 2
    Name: CGC_name: clec-17 Person_evidence: WBPerson655
      Sequence_name: E03H4.10
      Molecular_name: E03H4.10
        E03H4.10.1
        CE20647
      Other_name: CELE_E03H4.10 Accession_evidence: NDB BX284601
      Public_name: clec-17
    DB_info: Database: AceView gene 1N22
        WormQTL gene WBGene00008477
        WormFlux gene WBGene00008477
        NDB locus_tag CELE_E03H4.10
        Panther gene CAEEL|WormBase=WBGene00008477|UniProtKB=O17741
          family PTHR22991
        NCBI gene 173111
        RefSeq protein NM_060751.6
        TREEFAM TREEFAM_ID TF351663
        TrEMBL UniProtAcc O17741
        UniProt_GCRP UniProtAcc O17741
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:49 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 29 Apr 2005 13:53:45 WBPerson2970 Name_change: CGC_name: clec-17
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: clec
    Allele (30)
    RNASeq_FPKM (74)
    Ortholog (50)
    Paralog (52)
    Structured_description: Automated_description: Enriched in head mesodermal cell; intestine; male-specific anatomical entity; mechanosensory neurons; and pharyngeal muscle cell based on microarray; tiling array; and RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; tiling array; and RNA-seq studies. Is affected by thirty-six chemicals including Heme; hydrogen sulfide; and methylmercury hydroxide based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: C-type lectin fold; Spermadhesin, CUB domain superfamily; Lectin C-type domain; CUB domain; C-type lectin-like/link domain superfamily; and C-type lectin-like. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: E03H4.10
    Corresponding_transcript: E03H4.10.1
    Associated_feature: WBsf649663
      WBsf665023
      WBsf985560
      WBsf220429
  Experimental_info: RNAi_result: WBRNAi00043649 Inferred_automatically: RNAi_primary
      WBRNAi00078251 Inferred_automatically: RNAi_primary
      WBRNAi00003312 Inferred_automatically: RNAi_primary
      WBRNAi00030489 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1016074
      Expr1033688
      Expr1147634
      Expr2010098
      Expr2028341
    Drives_construct: WBCnstr00032940
    Construct_product: WBCnstr00032940
    Microarray_results (16)
    Expression_cluster (311)
    Interaction (13)
  Map_info: Map: I Position: 13.1994 Error: 0.001498
    Positive: Positive_clone: E03H4 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00027722
    WBPaper00031686
    WBPaper00033987
    WBPaper00037524
    WBPaper00038491
    WBPaper00039120
    WBPaper00055090
    WBPaper00059843
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene