WormBase Tree Display for Gene: WBGene00022679
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| WBGene00022679 | SMap | S_parent | Sequence | ZK180 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | ZK180.5 | |||||||
| Molecular_name | ZK180.5a | ||||||||
| ZK180.5a.1 | |||||||||
| CE07623 | |||||||||
| ZK180.5b | |||||||||
| CE31746 | |||||||||
| ZK180.5c | |||||||||
| CE28179 | |||||||||
| ZK180.5b.1 | |||||||||
| ZK180.5c.1 | |||||||||
| Other_name | CELE_ZK180.5 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | ZK180.5 | ||||||||
| DB_info | Database | AceView | gene | 4F280 | |||||
| WormQTL | gene | WBGene00022679 | |||||||
| WormFlux | gene | WBGene00022679 | |||||||
| NDB | locus_tag | CELE_ZK180.5 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00022679|UniProtKB=H2L0H1 | |||||||
| family | PTHR23261 | ||||||||
| NCBI | gene | 177218 | |||||||
| RefSeq | protein | NM_171906.6 | |||||||
| NM_171321.6 | |||||||||
| NM_171905.7 | |||||||||
| TREEFAM | TREEFAM_ID | TF315462 | |||||||
| TrEMBL | UniProtAcc | Q8MPR7 | |||||||
| H2L0H1 | |||||||||
| H2L0H2 | |||||||||
| UniProt_GCRP | UniProtAcc | H2L0H1 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:06 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (30) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (21) | |||||||||
| Structured_description | Automated_description | Enriched in several structures, including hypodermis; neurons; pharyngeal muscle cell; rectal epithelial cell; and somatic gonad precursor based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; quantitative PCR; tiling array; proteomic; and RNA-seq studies. Is affected by thirty-three chemicals including hydrogen sulfide; 1-methylnicotinamide; and nicotinic acid based on microarray; RNA-seq; and proteomic studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | ZK180.5a | |||||||
| ZK180.5b | |||||||||
| ZK180.5c | |||||||||
| Corresponding_transcript | ZK180.5a.1 | ||||||||
| ZK180.5b.1 | |||||||||
| ZK180.5c.1 | |||||||||
| Other_sequence (19) | |||||||||
| Associated_feature (14) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00103656 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00022515 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00059267 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00038222 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1026803 | ||||||||
| Expr1040023 | |||||||||
| Expr1162693 | |||||||||
| Expr2008779 | |||||||||
| Expr2027014 | |||||||||
| Drives_construct | WBCnstr00024058 | ||||||||
| Construct_product | WBCnstr00024058 | ||||||||
| Microarray_results (34) | |||||||||
| Expression_cluster (338) | |||||||||
| Interaction (128) | |||||||||
| Map_info | Positive | Positive_clone | ZK180 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | IV | 0.448602 | |||||||
| Method | Gene |
