WormBase Tree Display for Gene: WBGene00000717
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| WBGene00000717 | Evidence | Person_evidence | WBPerson345 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| WBPerson651 | |||||||||
| SMap | S_parent | Sequence | B0222 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | col-144 | Person_evidence | WBPerson345 | |||||
| Sequence_name | B0222.6 | ||||||||
| Molecular_name | B0222.6 | ||||||||
| B0222.6.1 | |||||||||
| CE25739 | |||||||||
| Other_name | CELE_B0222.6 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | col-144 | ||||||||
| DB_info | Database | AceView | gene | 5J640 | |||||
| WormQTL | gene | WBGene00000717 | |||||||
| WormFlux | gene | WBGene00000717 | |||||||
| NDB | locus_tag | CELE_B0222.6 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00000717|UniProtKB=Q17458 | |||||||
| family | PTHR24637 | ||||||||
| NCBI | gene | 179296 | |||||||
| RefSeq | protein | NM_001380721.2 | |||||||
| TREEFAM | TREEFAM_ID | TF316783 | |||||||
| TrEMBL | UniProtAcc | Q17458 | |||||||
| UniProt_GCRP | UniProtAcc | Q17458 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:21 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | col | ||||||||
| Allele (16) | |||||||||
| Strain | WBStrain00055602 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00058224 | ||||||||
| 00058225 | |||||||||
| 00107705 | |||||||||
| Ortholog (77) | |||||||||
| Paralog (39) | |||||||||
| Structured_description | Automated_description | Predicted to be a structural constituent of cuticle. Predicted to be part of collagen trimer. Expressed in hypodermis. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | B0222.6 | |||||||
| Corresponding_CDS_history | B0222.6:wp234 | ||||||||
| Corresponding_transcript | B0222.6.1 | ||||||||
| Other_sequence (95) | |||||||||
| Associated_feature | WBsf652888 | ||||||||
| WBsf234189 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00009603 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00009601 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00077702 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00103137 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00038757 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00028008 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr8251 | ||||||||
| Expr1025801 | |||||||||
| Expr1142968 | |||||||||
| Expr2010338 | |||||||||
| Expr2028581 | |||||||||
| Drives_construct | WBCnstr00013212 | ||||||||
| WBCnstr00037341 | |||||||||
| Construct_product | WBCnstr00037341 | ||||||||
| Microarray_results (17) | |||||||||
| Expression_cluster (294) | |||||||||
| Interaction (66) | |||||||||
| Map_info | Map | V | Position | 1.94697 | Error | 0.00019 | |||
| Positive | Positive_clone | B0222 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00025192 | ||||||||
| WBPaper00028809 | |||||||||
| WBPaper00032062 | |||||||||
| WBPaper00033811 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00065156 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
