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WormBase Tree Display for Gene: WBGene00000717

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Name Class

WBGene00000717EvidencePerson_evidenceWBPerson345
WBPerson651
SMapS_parentSequenceB0222
IdentityVersion1
NameCGC_namecol-144Person_evidenceWBPerson345
Sequence_nameB0222.6
Molecular_nameB0222.6
B0222.6.1
CE25739
Other_nameCELE_B0222.6Accession_evidenceNDBBX284605
Public_namecol-144
DB_infoDatabaseAceViewgene5J640
WormQTLgeneWBGene00000717
WormFluxgeneWBGene00000717
NDBlocus_tagCELE_B0222.6
PanthergeneCAEEL|WormBase=WBGene00000717|UniProtKB=Q17458
familyPTHR24637
NCBIgene179296
RefSeqproteinNM_001380721.2
TREEFAMTREEFAM_IDTF316783
TrEMBLUniProtAccQ17458
UniProt_GCRPUniProtAccQ17458
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:21WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classcol
Allele (16)
StrainWBStrain00055602
RNASeq_FPKM (74)
GO_annotation00058224
00058225
00107705
Ortholog (77)
ParalogWBGene00000596Caenorhabditis elegansFrom_analysisTreeFam
WBGene00000599Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00000616Caenorhabditis elegansFrom_analysisTreeFam
WBGene00000628Caenorhabditis elegansFrom_analysisTreeFam
WBGene00000632Caenorhabditis elegansFrom_analysisTreeFam
WBGene00000637Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00000638Caenorhabditis elegansFrom_analysisTreeFam
WBGene00000639Caenorhabditis elegansFrom_analysisTreeFam
WBGene00000641Caenorhabditis elegansFrom_analysisTreeFam
WBGene00000656Caenorhabditis elegansFrom_analysisTreeFam
WBGene00000664Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00000666Caenorhabditis elegansFrom_analysisTreeFam
WBGene00000676Caenorhabditis elegansFrom_analysisTreeFam
WBGene00000677Caenorhabditis elegansFrom_analysisTreeFam
WBGene00000681Caenorhabditis elegansFrom_analysisTreeFam
WBGene00000700Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00000701Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
WormBase-Compara
WBGene00000704Caenorhabditis elegansFrom_analysisTreeFam
WBGene00000714Caenorhabditis elegansFrom_analysisTreeFam
WBGene00000715Caenorhabditis elegansFrom_analysisTreeFam
WBGene00000716Caenorhabditis elegansFrom_analysisTreeFam
WBGene00005016Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00000749Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00000722Caenorhabditis elegansFrom_analysisTreeFam
WBGene00000723Caenorhabditis elegansFrom_analysisTreeFam
WBGene00000721Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00000757Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00000729Caenorhabditis elegansFrom_analysisTreeFam
WBGene00000720Caenorhabditis elegansFrom_analysisTreeFam
WBGene00000719Caenorhabditis elegansFrom_analysisTreeFam
WBGene00000718Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
Panther
WormBase-Compara
WBGene00000734Caenorhabditis elegansFrom_analysisTreeFam
WBGene00000735Caenorhabditis elegansFrom_analysisTreeFam
WBGene00000612Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000624Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000627Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000661Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00000760Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00001067Caenorhabditis elegansFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to be a structural constituent of cuticle. Predicted to be part of collagen trimer. Expressed in hypodermis.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSB0222.6
Corresponding_CDS_historyB0222.6:wp234
Corresponding_transcriptB0222.6.1
Other_sequence (95)
Associated_featureWBsf652888
WBsf234189
Experimental_infoRNAi_resultWBRNAi00009603Inferred_automaticallyRNAi_primary
WBRNAi00009601Inferred_automaticallyRNAi_primary
WBRNAi00077702Inferred_automaticallyRNAi_primary
WBRNAi00103137Inferred_automaticallyRNAi_primary
WBRNAi00038757Inferred_automaticallyRNAi_primary
WBRNAi00028008Inferred_automaticallyRNAi_primary
Expr_patternExpr8251
Expr1025801
Expr1142968
Expr2010338
Expr2028581
Drives_constructWBCnstr00013212
WBCnstr00037341
Construct_productWBCnstr00037341
Microarray_results (17)
Expression_cluster (294)
Interaction (66)
Map_infoMapVPosition1.94697Error0.00019
PositivePositive_cloneB0222Inferred_automaticallyFrom CDS info
From sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00025192
WBPaper00028809
WBPaper00032062
WBPaper00033811
WBPaper00038491
WBPaper00055090
WBPaper00065156
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene