WormBase Tree Display for Gene: WBGene00000664
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| WBGene00000664 | Evidence | Person_evidence | WBPerson345 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| WBPerson651 | |||||||||
| SMap | S_parent | Sequence | F17C8 | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | col-89 | Person_evidence | WBPerson345 | |||||
| Sequence_name | F17C8.2 | ||||||||
| Molecular_name | F17C8.2 | ||||||||
| F17C8.2.1 | |||||||||
| CE00956 | |||||||||
| Other_name | CELE_F17C8.2 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | col-89 | ||||||||
| DB_info | Database | AceView | gene | 3F837 | |||||
| WormQTL | gene | WBGene00000664 | |||||||
| WormFlux | gene | WBGene00000664 | |||||||
| NDB | locus_tag | CELE_F17C8.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00000664|UniProtKB=Q19528 | |||||||
| family | PTHR24637 | ||||||||
| NCBI | gene | 175627 | |||||||
| RefSeq | protein | NM_065574.4 | |||||||
| TREEFAM | TREEFAM_ID | TF316783 | |||||||
| TrEMBL | UniProtAcc | Q19528 | |||||||
| UniProt_GCRP | UniProtAcc | Q19528 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:21 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | col | ||||||||
| Allele (18) | |||||||||
| Strain | WBStrain00002199 | ||||||||
| WBStrain00002200 | |||||||||
| WBStrain00002326 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00065006 | ||||||||
| 00065007 | |||||||||
| 00105685 | |||||||||
| 00107659 | |||||||||
| Ortholog (29) | |||||||||
| Paralog (39) | |||||||||
| Structured_description | Automated_description | Predicted to be a structural constituent of cuticle. Involved in IRE1-mediated unfolded protein response. Predicted to be part of collagen trimer. Expressed in head; neurons; and tail. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F17C8.2 | |||||||
| Corresponding_transcript | F17C8.2.1 | ||||||||
| Other_sequence (273) | |||||||||
| Associated_feature | WBsf645120 | ||||||||
| WBsf992206 | |||||||||
| WBsf224791 | |||||||||
| WBsf224792 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00005077 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00013464 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00044883 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00031072 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00006864 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram335 | ||||||||
| Chronogram1774 | |||||||||
| Expr5782 | |||||||||
| Expr5783 | |||||||||
| Expr12109 | |||||||||
| Expr1019190 | |||||||||
| Expr1030391 | |||||||||
| Expr1148849 | |||||||||
| Expr2010435 | |||||||||
| Expr2028675 | |||||||||
| Drives_construct | WBCnstr00002942 | ||||||||
| WBCnstr00002943 | |||||||||
| WBCnstr00004466 | |||||||||
| WBCnstr00037387 | |||||||||
| Construct_product | WBCnstr00037387 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (234) | |||||||||
| Interaction (21) | |||||||||
| Map_info | Map | III | Position | -2.60226 | Error | 0.00352 | |||
| Positive | Positive_clone | F17C8 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
