WormBase Tree Display for Gene: WBGene00000717

WBGene00000717 Evidence: Person_evidence: WBPerson345
      WBPerson651
  SMap: S_parent: Sequence: B0222
  Identity: Version: 1
    Name: CGC_name: col-144 Person_evidence: WBPerson345
      Sequence_name: B0222.6
      Molecular_name: B0222.6
        B0222.6.1
        CE25739
      Other_name: CELE_B0222.6 Accession_evidence: NDB BX284605
      Public_name: col-144
    DB_info: Database: AceView gene 5J640
        WormQTL gene WBGene00000717
        WormFlux gene WBGene00000717
        NDB locus_tag CELE_B0222.6
        Panther gene CAEEL|WormBase=WBGene00000717|UniProtKB=Q17458
          family PTHR24637
        NCBI gene 179296
        RefSeq protein NM_001380721.2
        TREEFAM TREEFAM_ID TF316783
        TrEMBL UniProtAcc Q17458
        UniProt_GCRP UniProtAcc Q17458
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:21 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: col
    Allele (16)
    Strain: WBStrain00055602
    RNASeq_FPKM (74)
    GO_annotation: 00058224
      00058225
      00107705
    Ortholog (77)
    Paralog (39)
    Structured_description: Automated_description: Predicted to be a structural constituent of cuticle. Predicted to be part of collagen trimer. Expressed in hypodermis. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: B0222.6
    Corresponding_CDS_history: B0222.6:wp234
    Corresponding_transcript: B0222.6.1
    Other_sequence (95)
    Associated_feature: WBsf652888
      WBsf234189
  Experimental_info: RNAi_result: WBRNAi00009603 Inferred_automatically: RNAi_primary
      WBRNAi00009601 Inferred_automatically: RNAi_primary
      WBRNAi00077702 Inferred_automatically: RNAi_primary
      WBRNAi00103137 Inferred_automatically: RNAi_primary
      WBRNAi00038757 Inferred_automatically: RNAi_primary
      WBRNAi00028008 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr8251
      Expr1025801
      Expr1142968
      Expr2010338
      Expr2028581
    Drives_construct: WBCnstr00013212
      WBCnstr00037341
    Construct_product: WBCnstr00037341
    Microarray_results (17)
    Expression_cluster (294)
    Interaction: WBInteraction000030165
      WBInteraction000101429
      WBInteraction000101703
      WBInteraction000102451
      WBInteraction000102684
      WBInteraction000102958
      WBInteraction000103185
      WBInteraction000103960
      WBInteraction000104224
      WBInteraction000105292
      WBInteraction000107012
      WBInteraction000109608
      WBInteraction000110967
      WBInteraction000112691
      WBInteraction000115293
      WBInteraction000119180
      WBInteraction000119947
      WBInteraction000120094
      WBInteraction000122058
      WBInteraction000124786
      WBInteraction000133619
      WBInteraction000138975
      WBInteraction000145120
      WBInteraction000161514
      WBInteraction000163135
      WBInteraction000170931
      WBInteraction000183194
      WBInteraction000190612
      WBInteraction000195247
      WBInteraction000199097
      WBInteraction000199123
      WBInteraction000202894
      WBInteraction000236131
      WBInteraction000250953
      WBInteraction000252061
      WBInteraction000253805
      WBInteraction000266692
      WBInteraction000268843
      WBInteraction000290479
      WBInteraction000300121
      WBInteraction000316605
      WBInteraction000318455
      WBInteraction000332377
      WBInteraction000343630
      WBInteraction000347781
      WBInteraction000349081
      WBInteraction000349578
      WBInteraction000352585
      WBInteraction000353143
      WBInteraction000356437
      WBInteraction000368592
      WBInteraction000370387
      WBInteraction000385627
      WBInteraction000398670
      WBInteraction000411079
      WBInteraction000429276
      WBInteraction000433562
      WBInteraction000440633
      WBInteraction000459786
      WBInteraction000462906
      WBInteraction000465161
      WBInteraction000465813
      WBInteraction000475132
      WBInteraction000503712
      WBInteraction000552019
      WBInteraction000560176
  Map_info: Map: V Position: 1.94697 Error: 0.00019
    Positive: Positive_clone: B0222 Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00025192
    WBPaper00028809
    WBPaper00032062
    WBPaper00033811
    WBPaper00038491
    WBPaper00055090
    WBPaper00065156
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene