WormBase Tree Display for Gene: WBGene00019839
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| WBGene00019839 | SMap | S_parent | Sequence | R02F11 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | R02F11.1 | |||||||
| Molecular_name | R02F11.1 | ||||||||
| R02F11.1.1 | |||||||||
| CE12496 | |||||||||
| Other_name | CELE_R02F11.1 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | R02F11.1 | ||||||||
| DB_info | Database | AceView | gene | 5F281 | |||||
| WormQTL | gene | WBGene00019839 | |||||||
| WormFlux | gene | WBGene00019839 | |||||||
| NDB | locus_tag | CELE_R02F11.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00019839|UniProtKB=O16364 | |||||||
| family | PTHR34150 | ||||||||
| NCBI | gene | 178870 | |||||||
| RefSeq | protein | NM_071886.6 | |||||||
| TREEFAM | TREEFAM_ID | TF315341 | |||||||
| TrEMBL | UniProtAcc | O16364 | |||||||
| UniProt_GCRP | UniProtAcc | O16364 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:02 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (30) | |||||||||
| Strain | WBStrain00032838 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (30) | |||||||||
| Paralog | WBGene00004156 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WBGene00008073 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00010573 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00018492 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WormBase-Compara | |||||||||
| WBGene00044016 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00021504 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00022445 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00235273 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00020421 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| Structured_description | Automated_description | Enriched in arcade cell; pharyngeal-intestinal valve; pharynx; sensory neurons; and somatic gonad precursor based on microarray; tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray and RNA-seq studies. Is affected by twenty-six chemicals including methylmercury hydroxide; 1-methylnicotinamide; and D-glucose based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | R02F11.1 | |||||||
| Corresponding_transcript | R02F11.1.1 | ||||||||
| Other_sequence (16) | |||||||||
| Associated_feature (13) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00051144 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00034537 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00017329 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1026046 | ||||||||
| Expr1038603 | |||||||||
| Expr1154855 | |||||||||
| Expr2005332 | |||||||||
| Expr2023551 | |||||||||
| Drives_construct | WBCnstr00025555 | ||||||||
| Construct_product | WBCnstr00025555 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (242) | |||||||||
| Interaction (209) | |||||||||
| Map_info | Positive | Positive_clone | R02F11 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | -4.19046 | |||||||
| Reference | WBPaper00064648 | ||||||||
| Method | Gene |
