WormBase Tree Display for Gene: WBGene00020421

WBGene00020421 SMap: S_parent: Sequence: T10E10
  Identity: Version: 2
    Name: CGC_name: chtb-3 Person_evidence: WBPerson1820
      Sequence_name: T10E10.4
      Molecular_name: T10E10.4a
        T10E10.4a.1
        CE53505
        T10E10.4b
        CE54436
        T10E10.4b.1
      Other_name: T10E10.b Curator_confirmed: WBPerson1983
          Remark: Old cosmid naming mapped via unique overlapping PCR_product on CDSs
        CELE_T10E10.4 Accession_evidence: NDB BX284606
      Public_name: chtb-3
    DB_info: Database: AceView gene XG934
        WormQTL gene WBGene00020421
        WormFlux gene WBGene00020421
        NDB locus_tag CELE_T10E10.4
        Panther gene CAEEL|WormBase=WBGene00020421|UniProtKB=Q22378
          family PTHR34150
        NCBI gene 180906
        RefSeq protein NM_001404201.1
            NM_001375049.2
        TrEMBL UniProtAcc Q22378
            A0A8S4QGS8
        UniProt_GCRP UniProtAcc Q22378
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:03 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 04 Jan 2022 10:41:14 WBPerson1983 Name_change: CGC_name: chtb-3
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: chtb
    Allele (88)
    RNASeq_FPKM (74)
    GO_annotation: 00125052
    Ortholog (29)
    Paralog: WBGene00004156 Caenorhabditis elegans From_analysis: Panther
      WBGene00008073 Caenorhabditis elegans From_analysis: Panther
      WBGene00010573 Caenorhabditis elegans From_analysis: Panther
      WBGene00019839 Caenorhabditis elegans From_analysis: Panther
      WBGene00044016 Caenorhabditis elegans From_analysis: Panther
      WBGene00021504 Caenorhabditis elegans From_analysis: Panther
      WBGene00022445 Caenorhabditis elegans From_analysis: Panther
      WBGene00235273 Caenorhabditis elegans From_analysis: Panther
    Structured_description: Concise_description: T10E10.4 encodes a large (966-residue) protein, predicted to besecreted, with two N-terminal chitin-binding peritrophin-A domainsfollowed by 14 cysteine-rich domains and one C-terminal EB module; thegeneral organization of T10E10.4 protein resembles that of K04H4.2;T10E10.4 has no obvious function in mass RNAi assays but, like CEJ-1 andCPG-2, might participate in chitin synthesis. Paper_evidence: WBPaper00028588
            WBPaper00029231
            WBPaper00029232
          Curator_confirmed: WBPerson567
          Date_last_updated: 09 Apr 2007 00:00:00
      Automated_description: Predicted to enable chitin binding activity. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: T10E10.4a
      T10E10.4b
    Corresponding_CDS_history: T10E10.4:wp272
    Corresponding_transcript: T10E10.4a.1
      T10E10.4b.1
    Other_sequence: JI166331.1
      JI477601.1
      JI170910.1
    Associated_feature: WBsf654061
      WBsf670618
      WBsf670619
      WBsf1005552
      WBsf1005553
      WBsf1023089
      WBsf237470
  Experimental_info: RNAi_result: WBRNAi00018551 Inferred_automatically: RNAi_primary
      WBRNAi00000399 Inferred_automatically: RNAi_primary
      WBRNAi00053050 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1010454
      Expr1156654
      Expr2006078
      Expr2024292
    Drives_construct: WBCnstr00025154
    Construct_product: WBCnstr00025154
    Microarray_results (18)
    Expression_cluster (173)
    Interaction (26)
  Map_info: Map: X Position: -3.10406
    Positive: Positive_clone: T10E10 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene