WormBase Tree Display for Gene: WBGene00004156
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| WBGene00004156 | SMap | S_parent | Sequence | W02A2 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | pqn-74 | Person_evidence | WBPerson625 | |||||
| Sequence_name | W02A2.3 | ||||||||
| Molecular_name | W02A2.3a | ||||||||
| W02A2.3a.1 | |||||||||
| CE21233 | |||||||||
| W02A2.3b | |||||||||
| CE49768 | |||||||||
| W02A2.3b.1 | |||||||||
| Other_name | CELE_W02A2.3 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | pqn-74 | ||||||||
| DB_info | Database | AceView | gene | 4O94 | |||||
| WormQTL | gene | WBGene00004156 | |||||||
| WormFlux | gene | WBGene00004156 | |||||||
| NDB | locus_tag | CELE_W02A2.3 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00004156|UniProtKB=Q9XUB6 | |||||||
| family | PTHR34150 | ||||||||
| NCBI | gene | 178294 | |||||||
| RefSeq | protein | NM_001392428.1 | |||||||
| NM_070161.5 | |||||||||
| TrEMBL | UniProtAcc | Q9XUB6 | |||||||
| A0A061AKS9 | |||||||||
| UniProt_GCRP | UniProtAcc | Q9XUB6 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:34 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | pqn | ||||||||
| Allele (41) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00101656 | ||||||||
| 00112408 | |||||||||
| 00112409 | |||||||||
| Ortholog (28) | |||||||||
| Paralog | WBGene00010573 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WBGene00044016 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00021504 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00022445 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00019839 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00235273 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00008073 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00020421 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| Structured_description | Concise_description | pqn-74 encodes a protein with two chitin-binding peritrophin-A domains,separated by a glutamine/asparagine (Q/N)-rich ('prion') domain; likeCEJ-1 and CPG-2, PQN-74 might participate in eggshell synthesis andearly embryonic development, and PQN-74's peritrophin-A domains mightenable mechanical cross-linking of chitin. | Paper_evidence | WBPaper00005068 | |||||
| WBPaper00012788 | |||||||||
| WBPaper00012830 | |||||||||
| WBPaper00012882 | |||||||||
| WBPaper00012897 | |||||||||
| WBPaper00013003 | |||||||||
| WBPaper00028588 | |||||||||
| WBPaper00029231 | |||||||||
| WBPaper00029232 | |||||||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 09 Apr 2007 00:00:00 | ||||||||
| Automated_description | Predicted to enable chitin binding activity. Involved in endoplasmic reticulum unfolded protein response. Predicted to be located in extracellular region. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | W02A2.3a | |||||||
| W02A2.3b | |||||||||
| Corresponding_transcript | W02A2.3a.1 | ||||||||
| W02A2.3b.1 | |||||||||
| Other_sequence (34) | |||||||||
| Associated_feature | WBsf652334 | ||||||||
| WBsf668472 | |||||||||
| WBsf718229 | |||||||||
| WBsf998382 | |||||||||
| WBsf998383 | |||||||||
| WBsf998384 | |||||||||
| WBsf1018514 | |||||||||
| WBsf1018515 | |||||||||
| WBsf231114 | |||||||||
| Experimental_info | RNAi_result (11) | ||||||||
| Expr_pattern | Expr1011143 | ||||||||
| Expr1032026 | |||||||||
| Expr1158091 | |||||||||
| Expr2015071 | |||||||||
| Expr2033306 | |||||||||
| Drives_construct | WBCnstr00035663 | ||||||||
| Construct_product | WBCnstr00035663 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (267) | |||||||||
| Interaction (70) | |||||||||
| Map_info | Map | IV | Position | 8.53283 | Error | 0.000758 | |||
| Positive | Positive_clone | W02A2 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00026929 | ||||||||
| WBPaper00032230 | |||||||||
| WBPaper00064648 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
