WormBase Tree Display for Gene: WBGene00004174
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| WBGene00004174 | SMap | S_parent | Sequence | ZK1067 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | abu-14 | Paper_evidence | WBPaper00038304 | |||||
| Person_evidence | WBPerson3 | ||||||||
| Sequence_name | ZK1067.7 | ||||||||
| Molecular_name | ZK1067.7 | ||||||||
| ZK1067.7.1 | |||||||||
| CE40244 | |||||||||
| Other_name | pqn-95 | Person_evidence | WBPerson265 | ||||||
| CELE_ZK1067.7 | Accession_evidence | NDB | BX284602 | ||||||
| Public_name | abu-14 | ||||||||
| DB_info | Database | AceView | gene | 2J516 | |||||
| WormQTL | gene | WBGene00004174 | |||||||
| WormFlux | gene | WBGene00004174 | |||||||
| NDB | locus_tag | CELE_ZK1067.7 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00004174|UniProtKB=Q23390 | |||||||
| family | PTHR31895 | ||||||||
| NCBI | gene | 174464 | |||||||
| RefSeq | protein | NM_063565.9 | |||||||
| TREEFAM | TREEFAM_ID | TF320309 | |||||||
| TrEMBL | UniProtAcc | Q23390 | |||||||
| UniProt_GCRP | UniProtAcc | Q23390 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:34 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| 2 | 12 Apr 2011 11:48:32 | WBPerson2970 | Name_change | CGC_name | abu-14 | ||||
| Other_name | pqn-95 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | abu | ||||||||
| Allele (34) | |||||||||
| Strain | WBStrain00036519 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00078329 | ||||||||
| Ortholog (24) | |||||||||
| Paralog (26) | |||||||||
| Structured_description | Concise_description | The protein product of abu-14 is predicted to contain a glutamine/asparagine (Q/N)-rich ('prion') domain; abu-14 is transcriptionally up-regulated during times of cuticle synthesis, such as in late embryogenesis and in the molts; it is localized to the pharyngeal cuticle and is required for the function of the pharyngeal grinder. | Paper_evidence | WBPaper00005068 | |||||
| WBPaper00012788 | |||||||||
| WBPaper00012830 | |||||||||
| WBPaper00012882 | |||||||||
| WBPaper00012897 | |||||||||
| WBPaper00013003 | |||||||||
| WBPaper00045960 | |||||||||
| Person_evidence | WBPerson507 | ||||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson567 | |||||||||
| Date_last_updated | 13 Jul 2015 00:00:00 | ||||||||
| Automated_description | Involved in pharynx development. Expressed in buccal cavity; cuticle; grinder; marginal cell; and pharyngeal muscle cell. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | ZK1067.7 | |||||||
| Corresponding_CDS_history | ZK1067.7:wp158 | ||||||||
| Corresponding_transcript | ZK1067.7.1 | ||||||||
| Other_sequence | CJC14610_1 | ||||||||
| FG620557.1 | |||||||||
| Oden_isotig27569 | |||||||||
| FG620566.1 | |||||||||
| Dviv_isotig24030 | |||||||||
| Associated_feature (13) | |||||||||
| Experimental_info | RNAi_result (13) | ||||||||
| Expr_pattern | Expr3431 | ||||||||
| Expr12489 | |||||||||
| Expr1024777 | |||||||||
| Expr1032036 | |||||||||
| Expr1162525 | |||||||||
| Expr2009107 | |||||||||
| Expr2027343 | |||||||||
| Drives_construct | WBCnstr00011397 | ||||||||
| WBCnstr00021466 | |||||||||
| WBCnstr00037931 | |||||||||
| Construct_product | WBCnstr00021466 | ||||||||
| WBCnstr00037931 | |||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (282) | |||||||||
| Interaction (204) | |||||||||
| Map_info | Map | II | Position | 1.09512 | Error | 0.000238 | |||
| Positive | Positive_clone | ZK1067 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00026929 | ||||||||
| WBPaper00038304 | |||||||||
| WBPaper00045960 | |||||||||
| WBPaper00052304 | |||||||||
| WBPaper00064306 | |||||||||
| WBPaper00064648 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
