WormBase Tree Display for Expression_cluster: WBPaper00045401:N.parisii_34h_upregulated_N2

WBPaper00045401:N.parisii_34h_upregulated_N2 Description: Genes that showed significantly increased expression 34 hours after infection by Nematocida parisii in N2, according to Affymetrix microarray analysis.
  Species: Caenorhabditis elegans
  Algorithm: Differentially expressed transcripts were identified using the edgeR Bioconductor package (Empirical analysis of digital gene expression data in R, v 3.0.8). FDR cutoff was set to < 0.05, which yielded lists of genes with > 4-fold difference in expression.
  Reference: WBPaper00045401
  Based_on_WB_Release
  Microarray_results: 172272_x_at Fold change control vs infected: 285.346, p-value: 1.22E-21
    181586_at Fold change control vs infected: 106.58, p-value: 3.68E-14
    172264_x_at Fold change control vs infected: 84.874, p-value: 1.86E-21
    179626_at Fold change control vs infected: 68.637, p-value: 6.73E-21
    172274_x_at Fold change control vs infected: 62.068, p-value: 1.47E-19
    180569_at Fold change control vs infected: 56.573, p-value: 2.41E-21
    179384_at Fold change control vs infected: 55.014, p-value: 4.22E-21
    179301_at Fold change control vs infected: 46.382, p-value: 9.24E-21
    178435_at Fold change control vs infected: 43.181, p-value: 2.20E-19
    174215_s_at Fold change control vs infected: 38.817, p-value: 1.42E-19
    177638_at Fold change control vs infected: 37.478, p-value: 6.87E-18
    184569_at Fold change control vs infected: 36.139, p-value: 1.50E-11
    182654_at Fold change control vs infected: 34.824, p-value: 7.51E-06
    176376_at Fold change control vs infected: 29.765, p-value: 6.05E-07
    178516_at Fold change control vs infected: 27.059, p-value: 3.48E-10
    178924_at Fold change control vs infected: 24.318, p-value: 2.55E-13
    178233_at Fold change control vs infected: 20.511, p-value: 2.42E-05
    185434_at Fold change control vs infected: 19.367, p-value: 8.35E-06
    176349_s_at Fold change control vs infected: 16.899, p-value: 7.50E-17
    179629_at Fold change control vs infected: 16.003, p-value: 3.30E-06
    191543_at Fold change control vs infected: 15.388, p-value: 5.29E-19
    179522_at Fold change control vs infected: 13.903, p-value: 1.00E-11
    179428_at Fold change control vs infected: 13.844, p-value: 8.94E-07
    190507_at Fold change control vs infected: 12.857, p-value: 2.01E-11
    185669_at Fold change control vs infected: 12.755, p-value: 6.06E-14
    189015_at Fold change control vs infected: 11.477, p-value: 5.49E-17
    189419_at Fold change control vs infected: 9.966, p-value: 1.87E-17
    177656_at Fold change control vs infected: 9.539, p-value: 7.00E-07
    179105_at Fold change control vs infected: 9.476, p-value: 2.05E-06
    192266_s_at Fold change control vs infected: 7.903, p-value: 2.69E-08
    180973_at Fold change control vs infected: 7.764, p-value: 4.24E-16
    190307_s_at Fold change control vs infected: 7.602, p-value: 7.45E-17
    184840_at Fold change control vs infected: 7.408, p-value: 3.47E-13
    173224_s_at Fold change control vs infected: 7.338, p-value: 9.45E-07
    190825_at Fold change control vs infected: 5.922, p-value: 1.54E-11
    172724_x_at Fold change control vs infected: 5.581, p-value: 3.57E-08
    191219_at Fold change control vs infected: 5.352, p-value: 1.04E-08
    188228_at Fold change control vs infected: 5.276, p-value: 1.27E-14
    183880_at Fold change control vs infected: 5.126, p-value: 1.36E-05
    180544_s_at Fold change control vs infected: 4.351, p-value: 2.44E-11
    188229_s_at Fold change control vs infected: 4.044, p-value: 8.11E-13
    183815_at Fold change control vs infected: 3.777, p-value: 6.08E-11
    186390_at Fold change control vs infected: 3.592, p-value: 3.34E-09
    192280_s_at Fold change control vs infected: 3.529, p-value: 4.05E-11
    184295_at Fold change control vs infected: 3.494, p-value: 2.12E-10
    174102_at Fold change control vs infected: 3.485, p-value: 1.04E-05
    178075_at Fold change control vs infected: 3.484, p-value: 9.03E-09
    179204_s_at Fold change control vs infected: 3.269, p-value: 2.85E-10
    190958_s_at Fold change control vs infected: 3.237, p-value: 7.49E-06
    183848_at Fold change control vs infected: 3.182, p-value: 9.18E-11
    179651_s_at Fold change control vs infected: 3.158, p-value: 3.88E-10
    176044_at Fold change control vs infected: 3.135, p-value: 1.72E-10
    172589_x_at Fold change control vs infected: 3.094, p-value: 3.98E-07
    193009_at Fold change control vs infected: 3.024, p-value: 2.94E-10
    180810_at Fold change control vs infected: 3.023, p-value: 3.43E-10
    179499_s_at Fold change control vs infected: 2.885, p-value: 6.86E-09
    183744_at Fold change control vs infected: 2.864, p-value: 1.39E-09
    178412_at Fold change control vs infected: 2.859, p-value: 9.53E-07
    193659_at Fold change control vs infected: 2.7, p-value: 4.93E-07
    192359_s_at Fold change control vs infected: 2.681, p-value: 8.81E-07
    181555_at Fold change control vs infected: 2.655, p-value: 2.28E-08
    176271_at Fold change control vs infected: 2.655, p-value: 5.45E-08
    177818_at Fold change control vs infected: 2.64, p-value: 1.06E-08
    177038_at Fold change control vs infected: 2.574, p-value: 1.28E-08
    183458_at Fold change control vs infected: 2.503, p-value: 7.20E-06
    172901_x_at Fold change control vs infected: 2.489, p-value: 7.15E-08
    174012_s_at Fold change control vs infected: 2.44, p-value: 2.98E-07
    179202_at Fold change control vs infected: 2.432, p-value: 1.08E-04
    187085_s_at Fold change control vs infected: 2.383, p-value: 2.94E-07
    181666_at Fold change control vs infected: 2.285, p-value: 5.83E-05
    185153_s_at Fold change control vs infected: 2.217, p-value: 4.97E-07
    187084_at Fold change control vs infected: 2.195, p-value: 1.33E-06
    187668_at Fold change control vs infected: 2.189, p-value: 2.88E-05
    187985_at Fold change control vs infected: 2.117, p-value: 1.67E-06
    180925_at Fold change control vs infected: 2.114, p-value: 1.24E-06
    175726_s_at Fold change control vs infected: 2.107, p-value: 3.01E-05
    175691_s_at Fold change control vs infected: 2.095, p-value: 8.18E-06
    183561_s_at Fold change control vs infected: 2.046, p-value: 3.67E-06
    184456_at Fold change control vs infected: 2.015, p-value: 6.90E-05
    172871_x_at Fold change control vs infected: 2.006, p-value: 4.22E-06
    189735_at Fold change control vs infected: 2.006, p-value: 4.41E-06
    173688_s_at Fold change control vs infected: 2.003, p-value: 4.85E-06
    175447_at Fold change control vs infected: 2.001, p-value: 4.98E-06
  Gene: WBGene00009167
    WBGene00009169
    WBGene00009170
    WBGene00050959
    WBGene00219309
    WBGene00018345
    WBGene00009166
    WBGene00015227
    WBGene00009168
    WBGene00045401
    WBGene00007660
    WBGene00015225
    WBGene00008067
    WBGene00021081
    WBGene00138721
    WBGene00022476
    WBGene00007661
    WBGene00044708
    WBGene00007659
    WBGene00009908
    WBGene00015602
    WBGene00020774
    WBGene00007132
    WBGene00015455
    WBGene00007134
    WBGene00012398
    WBGene00012399
    WBGene00008267
    WBGene00023483
    WBGene00016912
    WBGene00008850
    WBGene00008069
    WBGene00007658
    WBGene00002026
    WBGene00018646
    WBGene00001884
    WBGene00001888
    WBGene00012910
    WBGene00002094
    WBGene00008269
    WBGene00003431
    WBGene00270321
    WBGene00004810
    WBGene00020228
    WBGene00018353
    WBGene00017667
    WBGene00012961
    WBGene00001885
    WBGene00001889
    WBGene00045416
    WBGene00045417
    WBGene00043702
    WBGene00012091
    WBGene00012101
    WBGene00009691
    WBGene00009898
    WBGene00007392
    WBGene00021518
    WBGene00020457
    WBGene00001993
    WBGene00011190
    WBGene00010296
    WBGene00010977
    WBGene00009824
    WBGene00000841
    WBGene00015216
    WBGene00016877
    WBGene00008068
    WBGene00022382
    WBGene00019057
    WBGene00002019
    WBGene00009957
    WBGene00011383
    WBGene00018911
    WBGene00017948
    WBGene00009434
    WBGene00001758
    WBGene00018562
    WBGene00004809
    WBGene00018643
    WBGene00003602
    WBGene00002915
    WBGene00009595
    WBGene00019208
    WBGene00001883
    WBGene00001887
    WBGene00002021
    WBGene00020674
    WBGene00012553
  Attribute_of: Microarray_experiment
  Regulation: Regulated_by_treatment: Microsporidia: Nematocida parisii
  Associated_with: Life_stage: WBls:0000057